Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 snoU2_19.1-201ENST00000362361 80 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 RNU6-944P-201ENST00000364023 107 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 Y_RNA.231-201ENST00000364358 102 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 SNORA25.9-201ENST00000365087 128 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 SNORA25B-201ENST00000365507 128 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 MIR181A1-201ENST00000385026 110 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 MTCO1P20-201ENST00000425366 358 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 SNAP23P1-201ENST00000433229 246 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 SEPT14P3-201ENST00000439401 183 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 AL732372.2-207ENST00000445840 183 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 SEPT14P2-201ENST00000453405 183 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 AC083904.1-201ENST00000487828 231 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 AK3P2-201ENST00000507976 429 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.58□□□□□ -2.16
HOXA9P31269 RPL39P5-202ENST00000512505 151 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 SEPT14P4-201ENST00000513445 186 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 SNORD60.2-201ENST00000516883 86 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 SNORA48.11-201ENST00000517015 89 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 RNU6-586P-201ENST00000517265 104 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.58□□□□□ -2.16
HOXA9P31269 FO082796.1-201ENST00000523795 183 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.58□□□□□ -2.16
HOXA9P31269 VN1R107P-201ENST00000601784 209 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 AC107304.1-201ENST00000604229 296 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 AC104458.1-201ENST00000608243 463 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 AC068137.4-201ENST00000638485 296 ntBASIC1.58□□□□□ -2.16
HOXA9P31269 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
HOXA9P31269 MIR126-201ENST00000362291 85 ntBASIC1.57□□□□□ -2.16
HOXA9P31269 RNY3P3-201ENST00000363816 102 ntBASIC1.57□□□□□ -2.16
HOXA9P31269 Y_RNA.256-201ENST00000364594 104 ntBASIC1.57□□□□□ -2.16
HOXA9P31269 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.57□□□□□ -2.16
HOXA9P31269 Y_RNA.615-201ENST00000410769 117 ntBASIC1.57□□□□□ -2.16
HOXA9P31269 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.57□□□□□ -2.16
HOXA9P31269 ERLEC1P1-201ENST00000433806 578 ntBASIC1.57□□□□□ -2.16
HOXA9P31269 MTND2P29-201ENST00000438595 412 ntBASIC1.57□□□□□ -2.16
HOXA9P31269 MTCO2P3-201ENST00000442543 421 ntBASIC1.57□□□□□ -2.16
HOXA9P31269 AC091874.1-201ENST00000511402 339 ntBASIC1.57□□□□□ -2.16
HOXA9P31269 SNORA44.1-201ENST00000517031 108 ntBASIC1.57□□□□□ -2.16
HOXA9P31269 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.57□□□□□ -2.16
HOXA9P31269 AC034114.1-201ENST00000520293 285 ntBASIC1.57□□□□□ -2.16
HOXA9P31269 RNU6-323P-201ENST00000521915 107 ntBASIC1.57□□□□□ -2.16
HOXA9P31269 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.57□□□□□ -2.16
HOXA9P31269 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.57□□□□□ -2.16
HOXA9P31269 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.57□□□□□ -2.16
HOXA9P31269 AC012557.2-201ENST00000605919 418 ntBASIC1.57□□□□□ -2.16
HOXA9P31269 RMST_6.1-201ENST00000611980 203 ntBASIC1.57□□□□□ -2.16
HOXA9P31269 DISC2.1-201ENST00000612827 205 ntBASIC1.57□□□□□ -2.16
HOXA9P31269 FAM157A-202ENST00000615155 405 ntBASIC1.57□□□□□ -2.16
HOXA9P31269 AC139792.2-201ENST00000624218 587 ntBASIC1.57□□□□□ -2.16
HOXA9P31269 AC090517.3-201ENST00000625170 141 ntBASIC1.57□□□□□ -2.16
HOXA9P31269 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.57□□□□□ -2.16
HOXA9P31269 AC024614.3-201ENST00000637860 256 ntBASIC1.57□□□□□ -2.16
HOXA9P31269 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.57□□□□□ -2.16
HOXA9P31269 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HOXA9P31269 AC121333.1-201ENST00000567488 2709 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 RNY4P14-201ENST00000363656 96 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 RNU6-1215P-201ENST00000384441 102 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 RNU6-997P-201ENST00000384725 107 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 MTCO1P21-201ENST00000416634 589 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXA9P31269 MRPS10P2-201ENST00000431226 381 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXA9P31269 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXA9P31269 RNA5SP57-201ENST00000459463 123 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 SNRPGP7-201ENST00000469016 106 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.56□□□□□ -2.16
HOXA9P31269 AC092436.3-201ENST00000511788 257 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXA9P31269 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXA9P31269 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXA9P31269 MTND1P35-201ENST00000526739 508 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 AC025423.5-201ENST00000550230 219 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXA9P31269 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.56□□□□□ -2.16
HOXA9P31269 MIR3198-2-201ENST00000577868 80 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 CTHRC1P1-201ENST00000605383 469 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 AC004492.1-201ENST00000607036 742 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 AL357078.3-201ENST00000607528 618 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 AC068944.2-201ENST00000610373 403 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 RMST_3.1-201ENST00000611651 109 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 AC063943.3-201ENST00000615562 356 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 AC008121.3-201ENST00000618726 433 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.56□□□□□ -2.16
HOXA9P31269 AL450472.1-202ENST00000637286 180 ntBASIC1.56□□□□□ -2.16
HOXA9P31269 RNU4-15P-201ENST00000362613 141 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 RNU6-1141P-201ENST00000364520 107 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 RNU6-1329P-201ENST00000365664 107 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 Y_RNA.402-201ENST00000383972 102 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 RNU6-332P-201ENST00000391193 108 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 MIR548F1-201ENST00000408667 84 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 RNU6-1245P-201ENST00000411130 106 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.55□□□□□ -2.16
HOXA9P31269 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.55□□□□□ -2.16
HOXA9P31269 RPL23AP95-201ENST00000426806 265 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 RPS15AP10-201ENST00000432472 382 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.55□□□□□ -2.16
HOXA9P31269 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms