Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC139712.2-201ENST00000424302 339 ntBASIC3.04□□□□□ -1.92
CD40P25942 AC006989.1-201ENST00000427212 131 ntBASIC3.04□□□□□ -1.92
CD40P25942 RPL23AP58-201ENST00000440453 469 ntBASIC3.04□□□□□ -1.92
CD40P25942 RPL23AP3-201ENST00000453844 468 ntBASIC3.04□□□□□ -1.92
CD40P25942 RN7SL601P-201ENST00000471221 293 ntBASIC3.04□□□□□ -1.92
CD40P25942 RNU2-27P-201ENST00000516185 142 ntBASIC3.04□□□□□ -1.92
CD40P25942 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.04□□□□□ -1.92
CD40P25942 MIR3668-201ENST00000582138 75 ntBASIC3.04□□□□□ -1.92
CD40P25942 AC007179.3-201ENST00000604976 235 ntBASIC3.04□□□□□ -1.92
CD40P25942 AC068205.3-201ENST00000636385 468 ntBASIC3.04□□□□□ -1.92
CD40P25942 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CD40P25942 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.04□□□□□ -1.92
CD40P25942 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.04□□□□□ -1.92
CD40P25942 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.04□□□□□ -1.92
CD40P25942 AC135776.4-201ENST00000624300 1904 ntBASIC3.03□□□□□ -1.92
CD40P25942 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.03□□□□□ -1.92
CD40P25942 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CD40P25942 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.03□□□□□ -1.92
CD40P25942 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CD40P25942 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CD40P25942 SNORA20.1-201ENST00000364790 130 ntBASIC3.03□□□□□ -1.92
CD40P25942 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.03□□□□□ -1.92
CD40P25942 MIR1294-201ENST00000408503 142 ntBASIC3.03□□□□□ -1.92
CD40P25942 RNA5SP504-201ENST00000410676 117 ntBASIC3.03□□□□□ -1.92
CD40P25942 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.03□□□□□ -1.92
CD40P25942 RPL21P10-201ENST00000463521 490 ntBASIC3.03□□□□□ -1.92
CD40P25942 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.03□□□□□ -1.92
CD40P25942 RN7SL594P-201ENST00000470590 287 ntBASIC3.03□□□□□ -1.92
CD40P25942 RPS23P5-201ENST00000495419 428 ntBASIC3.03□□□□□ -1.92
CD40P25942 AC083906.5-201ENST00000503722 328 ntBASIC3.03□□□□□ -1.92
CD40P25942 HMGB3P17-201ENST00000504195 649 ntBASIC3.03□□□□□ -1.92
CD40P25942 AC023141.11-201ENST00000508864 202 ntBASIC3.03□□□□□ -1.92
CD40P25942 RNU5F-4P-201ENST00000516581 114 ntBASIC3.03□□□□□ -1.92
CD40P25942 RNU6-1098P-201ENST00000516772 96 ntBASIC3.03□□□□□ -1.92
CD40P25942 RNU6-794P-201ENST00000517261 64 ntBASIC3.03□□□□□ -1.92
CD40P25942 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.03□□□□□ -1.92
CD40P25942 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.03□□□□□ -1.92
CD40P25942 AP002001.1-203ENST00000534002 267 ntBASIC3.03□□□□□ -1.92
CD40P25942 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.03□□□□□ -1.92
CD40P25942 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.03□□□□□ -1.92
CD40P25942 AC010900.2-201ENST00000604508 210 ntBASIC3.03□□□□□ -1.92
CD40P25942 AC004467.1-201ENST00000615678 330 ntBASIC3.03□□□□□ -1.92
CD40P25942 AC078938.1-201ENST00000620993 318 ntBASIC3.03□□□□□ -1.92
CD40P25942 AC006001.4-201ENST00000622243 395 ntBASIC3.03□□□□□ -1.92
CD40P25942 AC091932.3-201ENST00000624223 323 ntBASIC3.03□□□□□ -1.92
CD40P25942 IGHVIII-44-202ENST00000636235 289 ntBASIC3.03□□□□□ -1.92
CD40P25942 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.03□□□□□ -1.92
CD40P25942 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CD40P25942 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CD40P25942 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CD40P25942 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CD40P25942 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CD40P25942 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
CD40P25942 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CD40P25942 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CD40P25942 RNU1-33P-201ENST00000364249 162 ntBASIC3.02□□□□□ -1.93
CD40P25942 RNA5SP42-201ENST00000364278 115 ntBASIC3.02□□□□□ -1.93
CD40P25942 Y_RNA.331-201ENST00000365267 102 ntBASIC3.02□□□□□ -1.93
CD40P25942 Y_RNA.333-201ENST00000365274 102 ntBASIC3.02□□□□□ -1.93
CD40P25942 RNVU1-14-201ENST00000384770 164 ntBASIC3.02□□□□□ -1.93
CD40P25942 SNORD17-201ENST00000390930 237 ntBASIC3.02□□□□□ -1.93
CD40P25942 SNORA48.8-201ENST00000391324 134 ntBASIC3.02□□□□□ -1.93
CD40P25942 AL138878.1-201ENST00000405131 347 ntBASIC3.02□□□□□ -1.93
CD40P25942 MIR548H3-201ENST00000408771 118 ntBASIC3.02□□□□□ -1.93
CD40P25942 RNU6-847P-201ENST00000411115 108 ntBASIC3.02□□□□□ -1.93
CD40P25942 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.02□□□□□ -1.93
CD40P25942 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.02□□□□□ -1.93
CD40P25942 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.02□□□□□ -1.93
CD40P25942 RNU6-1023P-201ENST00000516137 106 ntBASIC3.02□□□□□ -1.93
CD40P25942 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.02□□□□□ -1.93
CD40P25942 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.02□□□□□ -1.93
CD40P25942 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.02□□□□□ -1.93
CD40P25942 RPL17P51-201ENST00000605218 238 ntBASIC3.02□□□□□ -1.93
CD40P25942 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.02□□□□□ -1.93
CD40P25942 AC127459.3-201ENST00000624328 466 ntBASIC3.02□□□□□ -1.93
CD40P25942 AC244205.2-202ENST00000635781 342 ntBASIC3.02□□□□□ -1.93
CD40P25942 MIR3674-201ENST00000636576 68 ntBASIC3.02□□□□□ -1.93
CD40P25942 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CD40P25942 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CD40P25942 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CD40P25942 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CD40P25942 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CD40P25942 MFSD8-233ENST00000641482 4860 ntBASIC3.01□□□□□ -1.93
CD40P25942 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CD40P25942 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CD40P25942 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.01□□□□□ -1.93
CD40P25942 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CD40P25942 RNU1-18P-201ENST00000363062 164 ntBASIC3.01□□□□□ -1.93
CD40P25942 Y_RNA.101-201ENST00000363154 102 ntBASIC3.01□□□□□ -1.93
CD40P25942 SNORD27-201ENST00000363981 72 ntBASIC3.01□□□□□ -1.93
CD40P25942 SNORA53-201ENST00000391141 249 ntBASIC3.01□□□□□ -1.93
CD40P25942 FO393413.1-201ENST00000402892 195 ntBASIC3.01□□□□□ -1.93
CD40P25942 SNORA11.1-201ENST00000408133 129 ntBASIC3.01□□□□□ -1.93
CD40P25942 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.01□□□□□ -1.93
CD40P25942 RNA5SP475-201ENST00000410568 110 ntBASIC3.01□□□□□ -1.93
CD40P25942 RN7SL93P-201ENST00000463035 293 ntBASIC3.01□□□□□ -1.93
CD40P25942 CKS1BP2-201ENST00000497342 240 ntBASIC3.01□□□□□ -1.93
CD40P25942 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.01□□□□□ -1.93
CD40P25942 MIR5047-201ENST00000579212 100 ntBASIC3.01□□□□□ -1.93
CD40P25942 AL109918.3-201ENST00000603072 338 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms