Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 SNORD27-201ENST00000363981 72 ntBASIC3.32□□□□□ -1.88
ATF4P18848 RNA5SP175-201ENST00000364275 119 ntBASIC3.32□□□□□ -1.88
ATF4P18848 RNU6-975P-201ENST00000384296 105 ntBASIC3.32□□□□□ -1.88
ATF4P18848 SNORA37-201ENST00000384504 129 ntBASIC3.32□□□□□ -1.88
ATF4P18848 AL603910.2-201ENST00000407268 136 ntBASIC3.32□□□□□ -1.88
ATF4P18848 MIR1185-2-201ENST00000408687 86 ntBASIC3.32□□□□□ -1.88
ATF4P18848 RPL19P1-201ENST00000411635 428 ntBASIC3.32□□□□□ -1.88
ATF4P18848 RPS27P29-201ENST00000463110 252 ntBASIC3.32□□□□□ -1.88
ATF4P18848 RPL35AP15-201ENST00000468042 339 ntBASIC3.32□□□□□ -1.88
ATF4P18848 RN7SL810P-201ENST00000493031 276 ntBASIC3.32□□□□□ -1.88
ATF4P18848 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.32□□□□□ -1.88
ATF4P18848 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.32□□□□□ -1.88
ATF4P18848 Y_RNA.680-201ENST00000516441 93 ntBASIC3.32□□□□□ -1.88
ATF4P18848 RN7SKP83-201ENST00000516512 178 ntBASIC3.32□□□□□ -1.88
ATF4P18848 RNU2-12P-201ENST00000517216 168 ntBASIC3.32□□□□□ -1.88
ATF4P18848 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.32□□□□□ -1.88
ATF4P18848 AL512605.2-201ENST00000592972 256 ntBASIC3.32□□□□□ -1.88
ATF4P18848 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
ATF4P18848 U2.14-201ENST00000615943 113 ntBASIC3.32□□□□□ -1.88
ATF4P18848 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.32□□□□□ -1.88
ATF4P18848 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.32□□□□□ -1.88
ATF4P18848 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.32□□□□□ -1.88
ATF4P18848 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATF4P18848 Y_RNA.44-201ENST00000362676 108 ntBASIC3.31□□□□□ -1.88
ATF4P18848 Y_RNA.136-201ENST00000363444 102 ntBASIC3.31□□□□□ -1.88
ATF4P18848 RNU6-454P-201ENST00000364292 107 ntBASIC3.31□□□□□ -1.88
ATF4P18848 RNA5SP125-201ENST00000364843 120 ntBASIC3.31□□□□□ -1.88
ATF4P18848 Y_RNA.515-201ENST00000384535 112 ntBASIC3.31□□□□□ -1.88
ATF4P18848 SUMO1P2-201ENST00000452524 304 ntBASIC3.31□□□□□ -1.88
ATF4P18848 AC016925.1-201ENST00000458303 298 ntBASIC3.31□□□□□ -1.88
ATF4P18848 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.31□□□□□ -1.88
ATF4P18848 AC104619.4-201ENST00000510773 249 ntBASIC3.31□□□□□ -1.88
ATF4P18848 MTND1P19-201ENST00000511780 315 ntBASIC3.31□□□□□ -1.88
ATF4P18848 RN7SKP282-201ENST00000516824 299 ntBASIC3.31□□□□□ -1.88
ATF4P18848 RN7SKP40-201ENST00000517211 242 ntBASIC3.31□□□□□ -1.88
ATF4P18848 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.31□□□□□ -1.88
ATF4P18848 AC090616.3-201ENST00000582184 217 ntBASIC3.31□□□□□ -1.88
ATF4P18848 AC141273.2-201ENST00000618989 130 ntBASIC3.31□□□□□ -1.88
ATF4P18848 snoZ196.1-201ENST00000625269 89 ntBASIC3.31□□□□□ -1.88
ATF4P18848 AL034408.1-202ENST00000636088 415 ntBASIC3.31□□□□□ -1.88
ATF4P18848 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.31□□□□□ -1.88
ATF4P18848 FAM35CP-201ENST00000554755 2470 ntBASIC3.31□□□□□ -1.88
ATF4P18848 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATF4P18848 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.31□□□□□ -1.88
ATF4P18848 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.3□□□□□ -1.88
ATF4P18848 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATF4P18848 RNA5SP509-201ENST00000364577 119 ntBASIC3.3□□□□□ -1.88
ATF4P18848 Y_RNA.257-201ENST00000364596 102 ntBASIC3.3□□□□□ -1.88
ATF4P18848 MIR659-201ENST00000384963 97 ntBASIC3.3□□□□□ -1.88
ATF4P18848 SNORD66.1-201ENST00000391230 76 ntBASIC3.3□□□□□ -1.88
ATF4P18848 MIR1179-201ENST00000408703 91 ntBASIC3.3□□□□□ -1.88
ATF4P18848 RNU6-1199P-201ENST00000411249 104 ntBASIC3.3□□□□□ -1.88
ATF4P18848 MRPS10P1-201ENST00000448483 130 ntBASIC3.3□□□□□ -1.88
ATF4P18848 AL137159.1-201ENST00000452808 512 ntBASIC3.3□□□□□ -1.88
ATF4P18848 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.3□□□□□ -1.88
ATF4P18848 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.3□□□□□ -1.88
ATF4P18848 U4atac.1-201ENST00000618345 95 ntBASIC3.3□□□□□ -1.88
ATF4P18848 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATF4P18848 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATF4P18848 AL513302.2-201ENST00000562313 1842 ntBASIC3.3□□□□□ -1.88
ATF4P18848 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATF4P18848 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
ATF4P18848 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
ATF4P18848 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.29□□□□□ -1.88
ATF4P18848 U3.40-201ENST00000408706 208 ntBASIC3.29□□□□□ -1.88
ATF4P18848 RNA5SP317-201ENST00000410176 116 ntBASIC3.29□□□□□ -1.88
ATF4P18848 RN7SKP202-201ENST00000410439 330 ntBASIC3.29□□□□□ -1.88
ATF4P18848 SNORA57.3-201ENST00000411095 141 ntBASIC3.29□□□□□ -1.88
ATF4P18848 RNA5SP311-201ENST00000411290 116 ntBASIC3.29□□□□□ -1.88
ATF4P18848 AC010618.1-201ENST00000469924 477 ntBASIC3.29□□□□□ -1.88
ATF4P18848 RPL21P126-201ENST00000470049 478 ntBASIC3.29□□□□□ -1.88
ATF4P18848 RNA5SP315-201ENST00000516340 116 ntBASIC3.29□□□□□ -1.88
ATF4P18848 RNU2-34P-201ENST00000516534 121 ntBASIC3.29□□□□□ -1.88
ATF4P18848 RNA5SP312-201ENST00000517068 116 ntBASIC3.29□□□□□ -1.88
ATF4P18848 AC079587.1-201ENST00000603846 277 ntBASIC3.29□□□□□ -1.88
ATF4P18848 AC004832.5-201ENST00000608677 401 ntBASIC3.29□□□□□ -1.88
ATF4P18848 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ATF4P18848 MIR6830-201ENST00000636015 70 ntBASIC3.29□□□□□ -1.88
ATF4P18848 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATF4P18848 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.29□□□□□ -1.88
ATF4P18848 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATF4P18848 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATF4P18848 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ATF4P18848 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
ATF4P18848 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.28□□□□□ -1.88
ATF4P18848 RNA5SP124-201ENST00000362739 110 ntBASIC3.28□□□□□ -1.88
ATF4P18848 AC009238.1-201ENST00000442165 424 ntBASIC3.28□□□□□ -1.88
ATF4P18848 UBBP3-201ENST00000445497 241 ntBASIC3.28□□□□□ -1.88
ATF4P18848 AC104389.3-201ENST00000445629 235 ntBASIC3.28□□□□□ -1.88
ATF4P18848 AC009237.6-201ENST00000446969 424 ntBASIC3.28□□□□□ -1.88
ATF4P18848 RN7SL442P-201ENST00000473804 320 ntBASIC3.28□□□□□ -1.88
ATF4P18848 RNU6-667P-201ENST00000517186 102 ntBASIC3.28□□□□□ -1.88
ATF4P18848 AC006064.5-201ENST00000541782 248 ntBASIC3.28□□□□□ -1.88
ATF4P18848 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.28□□□□□ -1.88
ATF4P18848 AC078938.1-201ENST00000620993 318 ntBASIC3.28□□□□□ -1.88
ATF4P18848 AC011944.2-201ENST00000624440 683 ntBASIC3.28□□□□□ -1.88
ATF4P18848 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
ATF4P18848 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.28□□□□□ -1.88
ATF4P18848 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
ATF4P18848 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms