Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 AC099513.1-201ENST00000490423 301 ntBASIC1.17□□□□□ -2.22
THRAP10827 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.17□□□□□ -2.22
THRAP10827 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.17□□□□□ -2.22
THRAP10827 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.17□□□□□ -2.22
THRAP10827 ATP5EP1-201ENST00000510257 156 ntBASIC1.17□□□□□ -2.22
THRAP10827 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.17□□□□□ -2.22
THRAP10827 SNORA18.6-201ENST00000516792 115 ntBASIC1.17□□□□□ -2.22
THRAP10827 RNU6-445P-201ENST00000516949 107 ntBASIC1.17□□□□□ -2.22
THRAP10827 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.17□□□□□ -2.22
THRAP10827 EIF4A1P12-201ENST00000551910 141 ntBASIC1.17□□□□□ -2.22
THRAP10827 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.17□□□□□ -2.22
THRAP10827 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.17□□□□□ -2.22
THRAP10827 SNORA77B-201ENST00000578179 125 ntBASIC1.17□□□□□ -2.22
THRAP10827 RSL24D1P11-201ENST00000591045 491 ntBASIC1.17□□□□□ -2.22
THRAP10827 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
THRAP10827 PCGEM1.1-201ENST00000613431 131 ntBASIC1.17□□□□□ -2.22
THRAP10827 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.17□□□□□ -2.22
THRAP10827 AL133216.2-202ENST00000634512 349 ntBASIC1.17□□□□□ -2.22
THRAP10827 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
THRAP10827 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
THRAP10827 RNU6-552P-201ENST00000362869 119 ntBASIC1.16□□□□□ -2.22
THRAP10827 SNORD31B-201ENST00000364977 69 ntBASIC1.16□□□□□ -2.22
THRAP10827 MIR520A-201ENST00000384862 85 ntBASIC1.16□□□□□ -2.22
THRAP10827 RNU6-360P-201ENST00000390944 104 ntBASIC1.16□□□□□ -2.22
THRAP10827 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
THRAP10827 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.16□□□□□ -2.22
THRAP10827 AL591704.2-201ENST00000421658 181 ntBASIC1.16□□□□□ -2.22
THRAP10827 MTCO2P11-201ENST00000431069 680 ntBASIC1.16□□□□□ -2.22
THRAP10827 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.16□□□□□ -2.22
THRAP10827 JTBP1-201ENST00000441314 247 ntBASIC1.16□□□□□ -2.22
THRAP10827 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.16□□□□□ -2.22
THRAP10827 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.16□□□□□ -2.22
THRAP10827 AL031274.1-201ENST00000450334 232 ntBASIC1.16□□□□□ -2.22
THRAP10827 AC007547.1-201ENST00000462177 490 ntBASIC1.16□□□□□ -2.22
THRAP10827 RPL9P9-202ENST00000466501 579 ntBASIC1.16□□□□□ -2.22
THRAP10827 COX6CP14-201ENST00000469580 174 ntBASIC1.16□□□□□ -2.22
THRAP10827 MTND3P7-201ENST00000474435 343 ntBASIC1.16□□□□□ -2.22
THRAP10827 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.16□□□□□ -2.22
THRAP10827 AK3P2-201ENST00000507976 429 ntBASIC1.16□□□□□ -2.22
THRAP10827 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.16□□□□□ -2.22
THRAP10827 RNA5SP445-201ENST00000515889 115 ntBASIC1.16□□□□□ -2.22
THRAP10827 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.16□□□□□ -2.22
THRAP10827 AC021231.3-201ENST00000558497 370 ntBASIC1.16□□□□□ -2.22
THRAP10827 CYP4A27P-201ENST00000567218 190 ntBASIC1.16□□□□□ -2.22
THRAP10827 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.16□□□□□ -2.22
THRAP10827 MIR4452-201ENST00000583004 71 ntBASIC1.16□□□□□ -2.22
THRAP10827 AC136443.5-201ENST00000603741 370 ntBASIC1.16□□□□□ -2.22
THRAP10827 AC025449.1-201ENST00000603896 529 ntBASIC1.16□□□□□ -2.22
THRAP10827 AC069114.2-201ENST00000604699 304 ntBASIC1.16□□□□□ -2.22
THRAP10827 Z84480.1-201ENST00000605131 311 ntBASIC1.16□□□□□ -2.22
THRAP10827 AL603755.1-201ENST00000619504 163 ntBASIC1.16□□□□□ -2.22
THRAP10827 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.16□□□□□ -2.22
THRAP10827 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
THRAP10827 MIR96-201ENST00000362288 78 ntBASIC1.15□□□□□ -2.23
THRAP10827 RNU6-271P-201ENST00000363858 105 ntBASIC1.15□□□□□ -2.23
THRAP10827 Y_RNA.255-201ENST00000364581 97 ntBASIC1.15□□□□□ -2.23
THRAP10827 RNU6-348P-201ENST00000384386 107 ntBASIC1.15□□□□□ -2.23
THRAP10827 RNU6-606P-201ENST00000384721 111 ntBASIC1.15□□□□□ -2.23
THRAP10827 SNORA12.2-201ENST00000391040 156 ntBASIC1.15□□□□□ -2.23
THRAP10827 MTCO1P21-201ENST00000416634 589 ntBASIC1.15□□□□□ -2.23
THRAP10827 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.15□□□□□ -2.23
THRAP10827 PIGFP2-201ENST00000421400 651 ntBASIC1.15□□□□□ -2.23
THRAP10827 C8orf59P1-201ENST00000429930 303 ntBASIC1.15□□□□□ -2.23
THRAP10827 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.15□□□□□ -2.23
THRAP10827 RPS29P28-201ENST00000446439 141 ntBASIC1.15□□□□□ -2.23
THRAP10827 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.15□□□□□ -2.23
THRAP10827 AC007395.1-201ENST00000451333 677 ntBASIC1.15□□□□□ -2.23
THRAP10827 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.15□□□□□ -2.23
THRAP10827 AC016925.1-201ENST00000458303 298 ntBASIC1.15□□□□□ -2.23
THRAP10827 RNU7-14P-201ENST00000459331 62 ntBASIC1.15□□□□□ -2.23
THRAP10827 RPL26P26-201ENST00000480251 434 ntBASIC1.15□□□□□ -2.23
THRAP10827 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.15□□□□□ -2.23
THRAP10827 AC010486.2-201ENST00000505572 483 ntBASIC1.15□□□□□ -2.23
THRAP10827 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.15□□□□□ -2.23
THRAP10827 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.15□□□□□ -2.23
THRAP10827 AC091874.1-201ENST00000511402 339 ntBASIC1.15□□□□□ -2.23
THRAP10827 RNU5F-4P-201ENST00000516581 114 ntBASIC1.15□□□□□ -2.23
THRAP10827 RNU6-902P-201ENST00000517212 91 ntBASIC1.15□□□□□ -2.23
THRAP10827 AC069113.1-201ENST00000517763 267 ntBASIC1.15□□□□□ -2.23
THRAP10827 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.15□□□□□ -2.23
THRAP10827 HMGB1P33-201ENST00000563485 527 ntBASIC1.15□□□□□ -2.23
THRAP10827 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.15□□□□□ -2.23
THRAP10827 AC078795.3-201ENST00000602913 472 ntBASIC1.15□□□□□ -2.23
THRAP10827 AC002044.1-201ENST00000606707 158 ntBASIC1.15□□□□□ -2.23
THRAP10827 MIR7111-201ENST00000619751 72 ntBASIC1.15□□□□□ -2.23
THRAP10827 AC009161.2-201ENST00000624626 138 ntBASIC1.15□□□□□ -2.23
THRAP10827 AC068205.3-201ENST00000636385 468 ntBASIC1.15□□□□□ -2.23
THRAP10827 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
THRAP10827 AL159152.1-201ENST00000635019 2587 ntBASIC1.14□□□□□ -2.23
THRAP10827 RNU6-266P-201ENST00000364225 107 ntBASIC1.14□□□□□ -2.23
THRAP10827 SNORD114-22-201ENST00000365423 72 ntBASIC1.14□□□□□ -2.23
THRAP10827 RNU6-827P-201ENST00000365553 106 ntBASIC1.14□□□□□ -2.23
THRAP10827 Y_RNA.399-201ENST00000383955 105 ntBASIC1.14□□□□□ -2.23
THRAP10827 RNU6-456P-201ENST00000384493 107 ntBASIC1.14□□□□□ -2.23
THRAP10827 RNY3P10-201ENST00000384764 102 ntBASIC1.14□□□□□ -2.23
THRAP10827 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
THRAP10827 RNU2-29P-201ENST00000410423 189 ntBASIC1.14□□□□□ -2.23
THRAP10827 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.14□□□□□ -2.23
THRAP10827 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.14□□□□□ -2.23
THRAP10827 AC133104.1-201ENST00000429100 218 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms