Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 SUB1P4-201ENST00000566062 339 ntBASIC2□□□□□ -2.09
APOA4P06727 AC015540.1-201ENST00000615828 501 ntBASIC2□□□□□ -2.09
APOA4P06727 5S_rRNA.11-201ENST00000618635 84 ntBASIC2□□□□□ -2.09
APOA4P06727 MTND5P9-201ENST00000503854 1755 ntBASIC2□□□□□ -2.09
APOA4P06727 RNU6-451P-201ENST00000362921 107 ntBASIC1.99□□□□□ -2.09
APOA4P06727 RNY3P3-201ENST00000363816 102 ntBASIC1.99□□□□□ -2.09
APOA4P06727 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
APOA4P06727 SNORA18.2-201ENST00000383865 132 ntBASIC1.99□□□□□ -2.09
APOA4P06727 RNU6-968P-201ENST00000384076 107 ntBASIC1.99□□□□□ -2.09
APOA4P06727 RNU6-933P-201ENST00000384424 107 ntBASIC1.99□□□□□ -2.09
APOA4P06727 SUMO2P12-201ENST00000405924 140 ntBASIC1.99□□□□□ -2.09
APOA4P06727 AL590002.1-201ENST00000406554 418 ntBASIC1.99□□□□□ -2.09
APOA4P06727 RNA5SP489-201ENST00000410986 109 ntBASIC1.99□□□□□ -2.09
APOA4P06727 AC016907.1-201ENST00000419483 435 ntBASIC1.99□□□□□ -2.09
APOA4P06727 MTCO3P46-201ENST00000425787 232 ntBASIC1.99□□□□□ -2.09
APOA4P06727 AC027124.2-201ENST00000428249 105 ntBASIC1.99□□□□□ -2.09
APOA4P06727 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.99□□□□□ -2.09
APOA4P06727 USP9YP28-201ENST00000435142 589 ntBASIC1.99□□□□□ -2.09
APOA4P06727 MTCO1P44-201ENST00000441935 243 ntBASIC1.99□□□□□ -2.09
APOA4P06727 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.99□□□□□ -2.09
APOA4P06727 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.99□□□□□ -2.09
APOA4P06727 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.99□□□□□ -2.09
APOA4P06727 RNU6-314P-201ENST00000516574 104 ntBASIC1.99□□□□□ -2.09
APOA4P06727 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.99□□□□□ -2.09
APOA4P06727 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.99□□□□□ -2.09
APOA4P06727 MRPS36P4-201ENST00000534436 298 ntBASIC1.99□□□□□ -2.09
APOA4P06727 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.99□□□□□ -2.09
APOA4P06727 MIR4648-201ENST00000580107 72 ntBASIC1.99□□□□□ -2.09
APOA4P06727 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.99□□□□□ -2.09
APOA4P06727 AC104458.1-201ENST00000608243 463 ntBASIC1.99□□□□□ -2.09
APOA4P06727 Y_RNA.783-201ENST00000613546 102 ntBASIC1.99□□□□□ -2.09
APOA4P06727 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.99□□□□□ -2.09
APOA4P06727 SNORD113-7-201ENST00000363762 77 ntBASIC1.98□□□□□ -2.09
APOA4P06727 Y_RNA.256-201ENST00000364594 104 ntBASIC1.98□□□□□ -2.09
APOA4P06727 RNA5SP126-201ENST00000365092 109 ntBASIC1.98□□□□□ -2.09
APOA4P06727 Y_RNA.373-201ENST00000365600 103 ntBASIC1.98□□□□□ -2.09
APOA4P06727 SNORA70B-201ENST00000384210 135 ntBASIC1.98□□□□□ -2.09
APOA4P06727 RNU6-784P-201ENST00000384330 106 ntBASIC1.98□□□□□ -2.09
APOA4P06727 MIR521-1-201ENST00000384902 87 ntBASIC1.98□□□□□ -2.09
APOA4P06727 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
APOA4P06727 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.98□□□□□ -2.09
APOA4P06727 Y_RNA.615-201ENST00000410769 117 ntBASIC1.98□□□□□ -2.09
APOA4P06727 AL139156.1-201ENST00000412785 841 ntBASIC1.98□□□□□ -2.09
APOA4P06727 NCOR1P3-201ENST00000420479 303 ntBASIC1.98□□□□□ -2.09
APOA4P06727 AL445646.1-201ENST00000431784 216 ntBASIC1.98□□□□□ -2.09
APOA4P06727 HMGN2P26-201ENST00000463169 339 ntBASIC1.98□□□□□ -2.09
APOA4P06727 YWHAEP4-201ENST00000505390 198 ntBASIC1.98□□□□□ -2.09
APOA4P06727 AC097473.1-201ENST00000508142 408 ntBASIC1.98□□□□□ -2.09
APOA4P06727 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.98□□□□□ -2.09
APOA4P06727 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.98□□□□□ -2.09
APOA4P06727 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.98□□□□□ -2.09
APOA4P06727 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.98□□□□□ -2.09
APOA4P06727 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.98□□□□□ -2.09
APOA4P06727 DEFB131C-201ENST00000528817 165 ntBASIC1.98□□□□□ -2.09
APOA4P06727 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.98□□□□□ -2.09
APOA4P06727 AL133215.3-201ENST00000609801 448 ntBASIC1.98□□□□□ -2.09
APOA4P06727 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.98□□□□□ -2.09
APOA4P06727 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.98□□□□□ -2.09
APOA4P06727 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
APOA4P06727 AC092881.1-201ENST00000638218 2733 ntBASIC1.97□□□□□ -2.09
APOA4P06727 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
APOA4P06727 Y_RNA.38-201ENST00000362617 102 ntBASIC1.97□□□□□ -2.09
APOA4P06727 AL645568.3-201ENST00000433683 316 ntBASIC1.97□□□□□ -2.09
APOA4P06727 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.97□□□□□ -2.09
APOA4P06727 AC010531.2-201ENST00000465012 153 ntBASIC1.97□□□□□ -2.09
APOA4P06727 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.97□□□□□ -2.09
APOA4P06727 TRBVA-201ENST00000498804 316 ntBASIC1.97□□□□□ -2.09
APOA4P06727 RNU2-44P-201ENST00000516795 194 ntBASIC1.97□□□□□ -2.09
APOA4P06727 SUMO2P18-201ENST00000518873 252 ntBASIC1.97□□□□□ -2.09
APOA4P06727 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.97□□□□□ -2.09
APOA4P06727 AC026470.2-201ENST00000561492 181 ntBASIC1.97□□□□□ -2.09
APOA4P06727 AC116312.1-201ENST00000606841 314 ntBASIC1.97□□□□□ -2.09
APOA4P06727 AF250324.2-201ENST00000608299 610 ntBASIC1.97□□□□□ -2.09
APOA4P06727 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.97□□□□□ -2.09
APOA4P06727 RMST_3.1-201ENST00000611651 109 ntBASIC1.97□□□□□ -2.09
APOA4P06727 AC005562.2-201ENST00000618264 111 ntBASIC1.97□□□□□ -2.09
APOA4P06727 uc_338.20-201ENST00000621563 178 ntBASIC1.97□□□□□ -2.09
APOA4P06727 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
APOA4P06727 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
APOA4P06727 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
APOA4P06727 AL356292.1-201ENST00000283110 373 ntBASIC1.96□□□□□ -2.1
APOA4P06727 Y_RNA.132-201ENST00000363421 102 ntBASIC1.96□□□□□ -2.1
APOA4P06727 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
APOA4P06727 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.96□□□□□ -2.1
APOA4P06727 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
APOA4P06727 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.96□□□□□ -2.1
APOA4P06727 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.96□□□□□ -2.1
APOA4P06727 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.96□□□□□ -2.1
APOA4P06727 MTCO2P7-201ENST00000446518 666 ntBASIC1.96□□□□□ -2.1
APOA4P06727 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.96□□□□□ -2.1
APOA4P06727 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.96□□□□□ -2.1
APOA4P06727 AC010409.1-201ENST00000487382 476 ntBASIC1.96□□□□□ -2.1
APOA4P06727 HMGB3P17-201ENST00000504195 649 ntBASIC1.96□□□□□ -2.1
APOA4P06727 AC096745.1-201ENST00000509945 370 ntBASIC1.96□□□□□ -2.1
APOA4P06727 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.96□□□□□ -2.1
APOA4P06727 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.96□□□□□ -2.1
APOA4P06727 ZNF519P2-201ENST00000557032 169 ntBASIC1.96□□□□□ -2.1
APOA4P06727 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.96□□□□□ -2.1
APOA4P06727 AC146944.4-201ENST00000602697 718 ntBASIC1.96□□□□□ -2.1
APOA4P06727 AC016727.2-201ENST00000603988 621 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms