Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC099654.5-201ENST00000636479 350 ntBASIC2.17□□□□□ -2.06
VTNP04004 MIR1302-1-201ENST00000637932 143 ntBASIC2.17□□□□□ -2.06
VTNP04004 AC112487.2-201ENST00000637950 304 ntBASIC2.17□□□□□ -2.06
VTNP04004 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VTNP04004 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
VTNP04004 Y_RNA.2-201ENST00000362330 96 ntBASIC2.16□□□□□ -2.06
VTNP04004 RNU6-1141P-201ENST00000364520 107 ntBASIC2.16□□□□□ -2.06
VTNP04004 Y_RNA.384-201ENST00000383909 102 ntBASIC2.16□□□□□ -2.06
VTNP04004 MIR583-201ENST00000384846 75 ntBASIC2.16□□□□□ -2.06
VTNP04004 SNORA40.18-201ENST00000391200 128 ntBASIC2.16□□□□□ -2.06
VTNP04004 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.16□□□□□ -2.06
VTNP04004 AC019129.1-201ENST00000403786 261 ntBASIC2.16□□□□□ -2.06
VTNP04004 RNU6-1050P-201ENST00000410388 107 ntBASIC2.16□□□□□ -2.06
VTNP04004 RN7SKP158-201ENST00000410453 326 ntBASIC2.16□□□□□ -2.06
VTNP04004 RNU2-63P-201ENST00000410792 194 ntBASIC2.16□□□□□ -2.06
VTNP04004 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.16□□□□□ -2.06
VTNP04004 CYCSP49-201ENST00000420810 319 ntBASIC2.16□□□□□ -2.06
VTNP04004 RPS29P27-201ENST00000463711 170 ntBASIC2.16□□□□□ -2.06
VTNP04004 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.16□□□□□ -2.06
VTNP04004 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.16□□□□□ -2.06
VTNP04004 RNU1-104P-201ENST00000517280 175 ntBASIC2.16□□□□□ -2.06
VTNP04004 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.16□□□□□ -2.06
VTNP04004 AC109329.1-201ENST00000518744 317 ntBASIC2.16□□□□□ -2.06
VTNP04004 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.16□□□□□ -2.06
VTNP04004 MRPS36P4-201ENST00000534436 298 ntBASIC2.16□□□□□ -2.06
VTNP04004 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.16□□□□□ -2.06
VTNP04004 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.16□□□□□ -2.06
VTNP04004 MIR5739-201ENST00000619803 80 ntBASIC2.16□□□□□ -2.06
VTNP04004 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
VTNP04004 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
VTNP04004 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
VTNP04004 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
VTNP04004 Y_RNA.48-201ENST00000362710 103 ntBASIC2.15□□□□□ -2.07
VTNP04004 RNA5SP393-201ENST00000363423 117 ntBASIC2.15□□□□□ -2.07
VTNP04004 Y_RNA.263-201ENST00000364659 114 ntBASIC2.15□□□□□ -2.07
VTNP04004 RNU6-142P-201ENST00000384019 107 ntBASIC2.15□□□□□ -2.07
VTNP04004 SNORA36A-201ENST00000384221 132 ntBASIC2.15□□□□□ -2.07
VTNP04004 RNU6-370P-201ENST00000411008 104 ntBASIC2.15□□□□□ -2.07
VTNP04004 AC022028.1-201ENST00000412054 408 ntBASIC2.15□□□□□ -2.07
VTNP04004 AL445685.2-201ENST00000422551 342 ntBASIC2.15□□□□□ -2.07
VTNP04004 AL133396.1-201ENST00000432048 687 ntBASIC2.15□□□□□ -2.07
VTNP04004 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.15□□□□□ -2.07
VTNP04004 AC003989.2-201ENST00000440224 169 ntBASIC2.15□□□□□ -2.07
VTNP04004 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.15□□□□□ -2.07
VTNP04004 AL121594.1-201ENST00000475906 575 ntBASIC2.15□□□□□ -2.07
VTNP04004 RPL30P1-201ENST00000488676 339 ntBASIC2.15□□□□□ -2.07
VTNP04004 AC016632.1-201ENST00000503994 196 ntBASIC2.15□□□□□ -2.07
VTNP04004 RNU5F-2P-201ENST00000516066 82 ntBASIC2.15□□□□□ -2.07
VTNP04004 RNU6-559P-201ENST00000516151 98 ntBASIC2.15□□□□□ -2.07
VTNP04004 Y_RNA.675-201ENST00000516389 149 ntBASIC2.15□□□□□ -2.07
VTNP04004 RNU6-1016P-201ENST00000516689 94 ntBASIC2.15□□□□□ -2.07
VTNP04004 SNORA31.16-201ENST00000516773 139 ntBASIC2.15□□□□□ -2.07
VTNP04004 RNU6-548P-201ENST00000517083 115 ntBASIC2.15□□□□□ -2.07
VTNP04004 AC115990.1-201ENST00000526957 301 ntBASIC2.15□□□□□ -2.07
VTNP04004 AC109446.1-201ENST00000566172 220 ntBASIC2.15□□□□□ -2.07
VTNP04004 AL713866.2-201ENST00000603579 219 ntBASIC2.15□□□□□ -2.07
VTNP04004 AL138963.2-201ENST00000605137 226 ntBASIC2.15□□□□□ -2.07
VTNP04004 AL132765.2-201ENST00000610812 351 ntBASIC2.15□□□□□ -2.07
VTNP04004 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.15□□□□□ -2.07
VTNP04004 AL159153.1-201ENST00000619688 317 ntBASIC2.15□□□□□ -2.07
VTNP04004 SNORD98-201ENST00000636377 67 ntBASIC2.15□□□□□ -2.07
VTNP04004 ZNF355P-201ENST00000427301 3216 ntBASIC2.15□□□□□ -2.07
VTNP04004 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.14□□□□□ -2.07
VTNP04004 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
VTNP04004 Y_RNA.67-201ENST00000362870 100 ntBASIC2.14□□□□□ -2.07
VTNP04004 RNU6-1285P-201ENST00000363480 105 ntBASIC2.14□□□□□ -2.07
VTNP04004 RNU6-1210P-201ENST00000363775 107 ntBASIC2.14□□□□□ -2.07
VTNP04004 RNU1-52P-201ENST00000384190 164 ntBASIC2.14□□□□□ -2.07
VTNP04004 Y_RNA.482-201ENST00000384377 111 ntBASIC2.14□□□□□ -2.07
VTNP04004 Y_RNA.594-201ENST00000410373 140 ntBASIC2.14□□□□□ -2.07
VTNP04004 RNU2-20P-201ENST00000410425 191 ntBASIC2.14□□□□□ -2.07
VTNP04004 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.14□□□□□ -2.07
VTNP04004 RPL23AP50-201ENST00000434149 455 ntBASIC2.14□□□□□ -2.07
VTNP04004 DAP3P1-201ENST00000441522 278 ntBASIC2.14□□□□□ -2.07
VTNP04004 AL021397.1-201ENST00000451806 248 ntBASIC2.14□□□□□ -2.07
VTNP04004 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.14□□□□□ -2.07
VTNP04004 Y_RNA.638-201ENST00000459374 113 ntBASIC2.14□□□□□ -2.07
VTNP04004 RPL7P42-201ENST00000481005 679 ntBASIC2.14□□□□□ -2.07
VTNP04004 Y_RNA.708-201ENST00000516950 96 ntBASIC2.14□□□□□ -2.07
VTNP04004 RNU6-1213P-201ENST00000517075 94 ntBASIC2.14□□□□□ -2.07
VTNP04004 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.14□□□□□ -2.07
VTNP04004 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.14□□□□□ -2.07
VTNP04004 FRG2DP-202ENST00000566967 323 ntBASIC2.14□□□□□ -2.07
VTNP04004 AC093249.1-201ENST00000567049 203 ntBASIC2.14□□□□□ -2.07
VTNP04004 AL355375.2-201ENST00000574825 175 ntBASIC2.14□□□□□ -2.07
VTNP04004 AC078795.3-201ENST00000602913 472 ntBASIC2.14□□□□□ -2.07
VTNP04004 AC113139.1-201ENST00000605049 239 ntBASIC2.14□□□□□ -2.07
VTNP04004 AC018462.2-201ENST00000605375 395 ntBASIC2.14□□□□□ -2.07
VTNP04004 AC009229.3-201ENST00000608056 282 ntBASIC2.14□□□□□ -2.07
VTNP04004 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.14□□□□□ -2.07
VTNP04004 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.14□□□□□ -2.07
VTNP04004 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.14□□□□□ -2.07
VTNP04004 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.14□□□□□ -2.07
VTNP04004 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.14□□□□□ -2.07
VTNP04004 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.14□□□□□ -2.07
VTNP04004 Y_RNA.58-201ENST00000362807 102 ntBASIC2.13□□□□□ -2.07
VTNP04004 Y_RNA.154-201ENST00000363624 102 ntBASIC2.13□□□□□ -2.07
VTNP04004 RNU4-56P-201ENST00000364700 142 ntBASIC2.13□□□□□ -2.07
VTNP04004 RNY3P1-201ENST00000365085 102 ntBASIC2.13□□□□□ -2.07
VTNP04004 RNA5SP240-201ENST00000365355 128 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms