Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 Y_RNA.286-201ENST00000364813 102 ntBASIC3.92□□□□□ -1.78
PRPF40AO75400 RNU6-338P-201ENST00000383888 105 ntBASIC3.92□□□□□ -1.78
PRPF40AO75400 Y_RNA.569-201ENST00000384749 103 ntBASIC3.92□□□□□ -1.78
PRPF40AO75400 SNORA46.1-201ENST00000391069 153 ntBASIC3.92□□□□□ -1.78
PRPF40AO75400 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.92□□□□□ -1.78
PRPF40AO75400 YME1L1P1-201ENST00000429435 297 ntBASIC3.92□□□□□ -1.78
PRPF40AO75400 RNU2-31P-201ENST00000516954 155 ntBASIC3.92□□□□□ -1.78
PRPF40AO75400 HSPE1P18-201ENST00000517602 280 ntBASIC3.92□□□□□ -1.78
PRPF40AO75400 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.92□□□□□ -1.78
PRPF40AO75400 AC103810.1-201ENST00000579873 453 ntBASIC3.92□□□□□ -1.78
PRPF40AO75400 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.92□□□□□ -1.78
PRPF40AO75400 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.92□□□□□ -1.78
PRPF40AO75400 AC099778.2-201ENST00000610904 211 ntBASIC3.92□□□□□ -1.78
PRPF40AO75400 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PRPF40AO75400 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRPF40AO75400 AC017071.1-201ENST00000564407 2204 ntBASIC3.91□□□□□ -1.78
PRPF40AO75400 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PRPF40AO75400 GABRG2-229ENST00000641017 3628 ntBASIC3.91□□□□□ -1.78
PRPF40AO75400 Y_RNA.331-201ENST00000365267 102 ntBASIC3.91□□□□□ -1.78
PRPF40AO75400 RNU6-514P-201ENST00000384208 107 ntBASIC3.91□□□□□ -1.78
PRPF40AO75400 RPL23AP36-201ENST00000413895 458 ntBASIC3.91□□□□□ -1.78
PRPF40AO75400 AC009310.1-201ENST00000414414 451 ntBASIC3.91□□□□□ -1.78
PRPF40AO75400 RPS29P4-201ENST00000414733 161 ntBASIC3.91□□□□□ -1.78
PRPF40AO75400 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.91□□□□□ -1.78
PRPF40AO75400 AC091153.1-201ENST00000466297 402 ntBASIC3.91□□□□□ -1.78
PRPF40AO75400 AC106707.2-201ENST00000484182 374 ntBASIC3.91□□□□□ -1.78
PRPF40AO75400 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.91□□□□□ -1.78
PRPF40AO75400 RAC1P5-201ENST00000512182 576 ntBASIC3.91□□□□□ -1.78
PRPF40AO75400 RNU1-143P-201ENST00000516296 146 ntBASIC3.91□□□□□ -1.78
PRPF40AO75400 AC008739.2-201ENST00000597006 317 ntBASIC3.91□□□□□ -1.78
PRPF40AO75400 U1.23-201ENST00000610293 146 ntBASIC3.91□□□□□ -1.78
PRPF40AO75400 TCL6_2.1-201ENST00000615162 119 ntBASIC3.91□□□□□ -1.78
PRPF40AO75400 RNU1-68P-201ENST00000615382 146 ntBASIC3.91□□□□□ -1.78
PRPF40AO75400 U1.39-201ENST00000621562 146 ntBASIC3.91□□□□□ -1.78
PRPF40AO75400 AC127459.3-201ENST00000624328 466 ntBASIC3.91□□□□□ -1.78
PRPF40AO75400 IGHVIII-44-202ENST00000636235 289 ntBASIC3.91□□□□□ -1.78
PRPF40AO75400 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.91□□□□□ -1.78
PRPF40AO75400 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRPF40AO75400 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRPF40AO75400 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
PRPF40AO75400 SNORA25.1-201ENST00000362326 128 ntBASIC3.9□□□□□ -1.79
PRPF40AO75400 RNA5SP119-201ENST00000362715 117 ntBASIC3.9□□□□□ -1.79
PRPF40AO75400 RNU6-326P-201ENST00000365480 107 ntBASIC3.9□□□□□ -1.79
PRPF40AO75400 CD24P4-201ENST00000382840 243 ntBASIC3.9□□□□□ -1.79
PRPF40AO75400 RNU6-1027P-201ENST00000383998 107 ntBASIC3.9□□□□□ -1.79
PRPF40AO75400 Y_RNA.539-201ENST00000384635 107 ntBASIC3.9□□□□□ -1.79
PRPF40AO75400 MIR7-3-201ENST00000384898 110 ntBASIC3.9□□□□□ -1.79
PRPF40AO75400 AC004386.2-201ENST00000441858 148 ntBASIC3.9□□□□□ -1.79
PRPF40AO75400 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF40AO75400 AC006445.1-201ENST00000491925 405 ntBASIC3.9□□□□□ -1.79
PRPF40AO75400 RNU4-71P-201ENST00000516258 113 ntBASIC3.9□□□□□ -1.79
PRPF40AO75400 SCARNA20.6-201ENST00000517251 106 ntBASIC3.9□□□□□ -1.79
PRPF40AO75400 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.9□□□□□ -1.79
PRPF40AO75400 AC011471.1-201ENST00000585766 187 ntBASIC3.9□□□□□ -1.79
PRPF40AO75400 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.9□□□□□ -1.79
PRPF40AO75400 MIR7851-201ENST00000610611 160 ntBASIC3.9□□□□□ -1.79
PRPF40AO75400 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PRPF40AO75400 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PRPF40AO75400 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRPF40AO75400 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.89□□□□□ -1.79
PRPF40AO75400 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
PRPF40AO75400 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.89□□□□□ -1.79
PRPF40AO75400 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.89□□□□□ -1.79
PRPF40AO75400 EIF4EP4-201ENST00000424916 578 ntBASIC3.89□□□□□ -1.79
PRPF40AO75400 RAB28P5-201ENST00000427490 651 ntBASIC3.89□□□□□ -1.79
PRPF40AO75400 POLR2KP2-201ENST00000438155 177 ntBASIC3.89□□□□□ -1.79
PRPF40AO75400 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.89□□□□□ -1.79
PRPF40AO75400 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.89□□□□□ -1.79
PRPF40AO75400 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.89□□□□□ -1.79
PRPF40AO75400 MIR5006-201ENST00000583027 110 ntBASIC3.89□□□□□ -1.79
PRPF40AO75400 RPL30P11-203ENST00000598995 310 ntBASIC3.89□□□□□ -1.79
PRPF40AO75400 AC002064.3-201ENST00000623448 346 ntBASIC3.89□□□□□ -1.79
PRPF40AO75400 AC090517.3-201ENST00000625170 141 ntBASIC3.89□□□□□ -1.79
PRPF40AO75400 AC073476.4-201ENST00000628409 72 ntBASIC3.89□□□□□ -1.79
PRPF40AO75400 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PRPF40AO75400 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
PRPF40AO75400 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.88□□□□□ -1.79
PRPF40AO75400 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PRPF40AO75400 RNU6-486P-201ENST00000363116 107 ntBASIC3.88□□□□□ -1.79
PRPF40AO75400 RNA5SP197-201ENST00000363357 119 ntBASIC3.88□□□□□ -1.79
PRPF40AO75400 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PRPF40AO75400 SNORA18.2-201ENST00000383865 132 ntBASIC3.88□□□□□ -1.79
PRPF40AO75400 RNU6-1310P-201ENST00000384153 107 ntBASIC3.88□□□□□ -1.79
PRPF40AO75400 CYCSP4-201ENST00000429682 331 ntBASIC3.88□□□□□ -1.79
PRPF40AO75400 AC005042.3-201ENST00000453230 174 ntBASIC3.88□□□□□ -1.79
PRPF40AO75400 AC091179.1-201ENST00000461606 579 ntBASIC3.88□□□□□ -1.79
PRPF40AO75400 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.88□□□□□ -1.79
PRPF40AO75400 PHBP14-201ENST00000512887 367 ntBASIC3.88□□□□□ -1.79
PRPF40AO75400 SCARNA17.1-201ENST00000516211 143 ntBASIC3.88□□□□□ -1.79
PRPF40AO75400 SCARNA17.2-201ENST00000516334 143 ntBASIC3.88□□□□□ -1.79
PRPF40AO75400 RNU6-107P-201ENST00000516643 102 ntBASIC3.88□□□□□ -1.79
PRPF40AO75400 MIR3922-201ENST00000585192 84 ntBASIC3.88□□□□□ -1.79
PRPF40AO75400 AC008749.1-201ENST00000597650 306 ntBASIC3.88□□□□□ -1.79
PRPF40AO75400 U3.45-201ENST00000607547 219 ntBASIC3.88□□□□□ -1.79
PRPF40AO75400 SCARNA17.4-201ENST00000614296 143 ntBASIC3.88□□□□□ -1.79
PRPF40AO75400 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRPF40AO75400 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRPF40AO75400 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.87□□□□□ -1.79
PRPF40AO75400 Y_RNA.44-201ENST00000362676 108 ntBASIC3.87□□□□□ -1.79
PRPF40AO75400 RNU6-200P-201ENST00000364743 107 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 251.6 ms