Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.97□□□□□ -2.25
SHOX2O60902 AC002486.1-201ENST00000435098 391 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 AL512286.1-201ENST00000439244 400 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 AC004854.1-201ENST00000440356 349 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 AL163195.1-201ENST00000496941 348 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 AC016632.1-201ENST00000503994 196 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 AC079140.5-201ENST00000507882 310 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 SNORA31.16-201ENST00000516773 139 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.97□□□□□ -2.25
SHOX2O60902 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.97□□□□□ -2.25
SHOX2O60902 AC022878.1-201ENST00000530684 149 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 HSPE1P4-201ENST00000550617 308 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 EIF4A1P12-201ENST00000551910 141 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 AC090115.3-201ENST00000553218 849 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.97□□□□□ -2.25
SHOX2O60902 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.97□□□□□ -2.25
SHOX2O60902 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.97□□□□□ -2.25
SHOX2O60902 AP003465.2-201ENST00000602571 373 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 AC112191.3-201ENST00000604371 277 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 AC008945.2-201ENST00000606056 604 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 TUSC7.1-201ENST00000610969 165 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 PCGEM1.1-201ENST00000613431 131 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 MIR8065-201ENST00000620577 100 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 U6.114-201ENST00000636407 96 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 RNU6-862P-201ENST00000362804 105 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 SNORD114-23-201ENST00000363536 72 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 RNU1-96P-201ENST00000364163 162 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 RNU6-336P-201ENST00000364891 107 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 RNU6-25P-201ENST00000383873 107 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 RNU6-48P-201ENST00000384161 107 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 RNU6-16P-201ENST00000384385 107 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 RNU6-1026P-201ENST00000384465 108 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 RNU6-692P-201ENST00000384496 107 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 RNU6-15P-201ENST00000384534 107 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 RNU6-29P-201ENST00000384637 107 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 HIGD1AP15-201ENST00000416198 280 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 MTATP6P16-201ENST00000434543 526 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 GAPDHP17-201ENST00000449858 1001 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 AC013470.1-201ENST00000453438 462 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 snoU13.30-201ENST00000458951 104 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 snoU13.27-201ENST00000459278 104 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 RNU7-14P-201ENST00000459331 62 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 MTCO3P28-201ENST00000513351 515 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 RNU6-405P-201ENST00000516637 110 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.96□□□□□ -2.26
SHOX2O60902 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.96□□□□□ -2.26
SHOX2O60902 MTCO2P2-201ENST00000591258 225 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 Z99289.3-201ENST00000605586 594 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 AL121992.2-201ENST00000606262 256 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
SHOX2O60902 AC099654.5-201ENST00000636479 350 ntBASIC0.96□□□□□ -2.26
SHOX2O60902 RNU6-500P-201ENST00000362349 107 ntBASIC0.95□□□□□ -2.26
SHOX2O60902 Y_RNA.136-201ENST00000363444 102 ntBASIC0.95□□□□□ -2.26
SHOX2O60902 SNORA18.2-201ENST00000383865 132 ntBASIC0.95□□□□□ -2.26
SHOX2O60902 SNORA29-201ENST00000384183 140 ntBASIC0.95□□□□□ -2.26
SHOX2O60902 SNORA12.2-201ENST00000391040 156 ntBASIC0.95□□□□□ -2.26
SHOX2O60902 RPS29P13-201ENST00000402041 169 ntBASIC0.95□□□□□ -2.26
SHOX2O60902 MIR1265-201ENST00000408444 86 ntBASIC0.95□□□□□ -2.26
SHOX2O60902 MTCO2P23-201ENST00000425216 680 ntBASIC0.95□□□□□ -2.26
SHOX2O60902 AL133396.1-201ENST00000432048 687 ntBASIC0.95□□□□□ -2.26
SHOX2O60902 USP9YP12-201ENST00000450481 570 ntBASIC0.95□□□□□ -2.26
SHOX2O60902 AC007547.1-201ENST00000462177 490 ntBASIC0.95□□□□□ -2.26
SHOX2O60902 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.95□□□□□ -2.26
SHOX2O60902 AL133373.1-201ENST00000497098 94 ntBASIC0.95□□□□□ -2.26
SHOX2O60902 SCARNA24.1-201ENST00000516465 137 ntBASIC0.95□□□□□ -2.26
SHOX2O60902 RNU6-1098P-201ENST00000516772 96 ntBASIC0.95□□□□□ -2.26
SHOX2O60902 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.95□□□□□ -2.26
SHOX2O60902 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.95□□□□□ -2.26
SHOX2O60902 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.95□□□□□ -2.26
SHOX2O60902 CYP3A52P-201ENST00000563326 91 ntBASIC0.95□□□□□ -2.26
SHOX2O60902 AC107304.1-201ENST00000604229 296 ntBASIC0.95□□□□□ -2.26
SHOX2O60902 AP000240.1-201ENST00000609910 452 ntBASIC0.95□□□□□ -2.26
SHOX2O60902 RNU1-76P-201ENST00000362903 159 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 SNORD32A-201ENST00000364805 84 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 RNU5E-5P-201ENST00000365379 116 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 MIR194-1-201ENST00000384892 85 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 MTCO2P8-201ENST00000412213 658 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.94□□□□□ -2.26
SHOX2O60902 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.94□□□□□ -2.26
SHOX2O60902 RPL23AP95-201ENST00000426806 265 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 PGBD4P5-201ENST00000445958 426 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 HMGN2P9-201ENST00000476875 229 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 MTATP6P9-201ENST00000515039 680 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 RNU6-311P-201ENST00000516224 102 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 RNU11-2P-201ENST00000516898 142 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.94□□□□□ -2.26
SHOX2O60902 AP003072.2-201ENST00000527756 676 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 ZNF321P-202ENST00000550843 495 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.94□□□□□ -2.26
SHOX2O60902 CYP4A27P-201ENST00000567218 190 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 MTND1P8-201ENST00000571424 950 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.94□□□□□ -2.26
SHOX2O60902 MIR3976-201ENST00000606807 139 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 AL353149.1-201ENST00000610667 244 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.94□□□□□ -2.26
SHOX2O60902 MIR7844-201ENST00000616161 122 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 AL136221.1-201ENST00000621449 509 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 AC010608.3-201ENST00000625048 527 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms