Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 MIR3117-201ENST00000584034 78 ntBASIC3.8□□□□□ -1.8
SMARCA5O60264 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.8□□□□□ -1.8
SMARCA5O60264 AC096577.2-201ENST00000611455 153 ntBASIC3.8□□□□□ -1.8
SMARCA5O60264 AC007318.2-201ENST00000620999 243 ntBASIC3.8□□□□□ -1.8
SMARCA5O60264 MIR3651-201ENST00000630427 90 ntBASIC3.8□□□□□ -1.8
SMARCA5O60264 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMARCA5O60264 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.8□□□□□ -1.8
SMARCA5O60264 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMARCA5O60264 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMARCA5O60264 Y_RNA.405-201ENST00000383979 100 ntBASIC3.79□□□□□ -1.8
SMARCA5O60264 Y_RNA.451-201ENST00000384200 100 ntBASIC3.79□□□□□ -1.8
SMARCA5O60264 Y_RNA.524-201ENST00000384564 100 ntBASIC3.79□□□□□ -1.8
SMARCA5O60264 Y_RNA.561-201ENST00000384694 100 ntBASIC3.79□□□□□ -1.8
SMARCA5O60264 MIR190B-201ENST00000401119 79 ntBASIC3.79□□□□□ -1.8
SMARCA5O60264 RNU4-47P-201ENST00000410876 114 ntBASIC3.79□□□□□ -1.8
SMARCA5O60264 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.79□□□□□ -1.8
SMARCA5O60264 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.79□□□□□ -1.8
SMARCA5O60264 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.79□□□□□ -1.8
SMARCA5O60264 UBBP3-201ENST00000445497 241 ntBASIC3.79□□□□□ -1.8
SMARCA5O60264 RPL39P29-201ENST00000447779 157 ntBASIC3.79□□□□□ -1.8
SMARCA5O60264 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.79□□□□□ -1.8
SMARCA5O60264 AC008885.1-201ENST00000514930 301 ntBASIC3.79□□□□□ -1.8
SMARCA5O60264 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.79□□□□□ -1.8
SMARCA5O60264 Y_RNA.700-201ENST00000516806 100 ntBASIC3.79□□□□□ -1.8
SMARCA5O60264 AL442163.3-201ENST00000554110 156 ntBASIC3.79□□□□□ -1.8
SMARCA5O60264 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.79□□□□□ -1.8
SMARCA5O60264 MIR5004-201ENST00000579078 107 ntBASIC3.79□□□□□ -1.8
SMARCA5O60264 MIR376A1-201ENST00000616574 68 ntBASIC3.79□□□□□ -1.8
SMARCA5O60264 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.79□□□□□ -1.8
SMARCA5O60264 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMARCA5O60264 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMARCA5O60264 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMARCA5O60264 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMARCA5O60264 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.78□□□□□ -1.8
SMARCA5O60264 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.78□□□□□ -1.8
SMARCA5O60264 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SMARCA5O60264 Y_RNA.29-201ENST00000362570 113 ntBASIC3.78□□□□□ -1.8
SMARCA5O60264 Y_RNA.143-201ENST00000363520 106 ntBASIC3.78□□□□□ -1.8
SMARCA5O60264 SNORD56.5-201ENST00000364281 72 ntBASIC3.78□□□□□ -1.8
SMARCA5O60264 Y_RNA.352-201ENST00000365439 102 ntBASIC3.78□□□□□ -1.8
SMARCA5O60264 Y_RNA.541-201ENST00000384640 113 ntBASIC3.78□□□□□ -1.8
SMARCA5O60264 SNORD15B-201ENST00000384714 146 ntBASIC3.78□□□□□ -1.8
SMARCA5O60264 MIR544A-201ENST00000384855 91 ntBASIC3.78□□□□□ -1.8
SMARCA5O60264 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SMARCA5O60264 MRPL35P1-201ENST00000404272 572 ntBASIC3.78□□□□□ -1.8
SMARCA5O60264 AL139156.1-201ENST00000412785 841 ntBASIC3.78□□□□□ -1.8
SMARCA5O60264 AC096920.1-201ENST00000423991 241 ntBASIC3.78□□□□□ -1.8
SMARCA5O60264 RPL30P4-201ENST00000429309 333 ntBASIC3.78□□□□□ -1.8
SMARCA5O60264 AL445687.1-201ENST00000439946 251 ntBASIC3.78□□□□□ -1.8
SMARCA5O60264 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.78□□□□□ -1.8
SMARCA5O60264 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.78□□□□□ -1.8
SMARCA5O60264 RN7SL807P-201ENST00000470923 297 ntBASIC3.78□□□□□ -1.8
SMARCA5O60264 AC097372.5-201ENST00000623665 376 ntBASIC3.78□□□□□ -1.8
SMARCA5O60264 AC241585.2-209ENST00000638217 143 ntBASIC3.78□□□□□ -1.8
SMARCA5O60264 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.77□□□□□ -1.81
SMARCA5O60264 RNU6-1141P-201ENST00000364520 107 ntBASIC3.77□□□□□ -1.81
SMARCA5O60264 SNORA70.4-201ENST00000365509 134 ntBASIC3.77□□□□□ -1.81
SMARCA5O60264 RNU6-886P-201ENST00000384319 105 ntBASIC3.77□□□□□ -1.81
SMARCA5O60264 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.77□□□□□ -1.81
SMARCA5O60264 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.77□□□□□ -1.81
SMARCA5O60264 Z82188.1-201ENST00000436709 154 ntBASIC3.77□□□□□ -1.81
SMARCA5O60264 AL513124.1-201ENST00000450410 614 ntBASIC3.77□□□□□ -1.81
SMARCA5O60264 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.77□□□□□ -1.81
SMARCA5O60264 RNU7-87P-201ENST00000459343 62 ntBASIC3.77□□□□□ -1.81
SMARCA5O60264 AC109329.2-201ENST00000519658 482 ntBASIC3.77□□□□□ -1.81
SMARCA5O60264 AP002770.2-201ENST00000543613 532 ntBASIC3.77□□□□□ -1.81
SMARCA5O60264 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
SMARCA5O60264 RNU6-1266P-201ENST00000362794 105 ntBASIC3.76□□□□□ -1.81
SMARCA5O60264 Y_RNA.123-201ENST00000363338 102 ntBASIC3.76□□□□□ -1.81
SMARCA5O60264 RNA5SP387-201ENST00000364226 106 ntBASIC3.76□□□□□ -1.81
SMARCA5O60264 Y_RNA.439-201ENST00000384119 94 ntBASIC3.76□□□□□ -1.81
SMARCA5O60264 RNU6-102P-201ENST00000384485 104 ntBASIC3.76□□□□□ -1.81
SMARCA5O60264 SNORA46-201ENST00000384762 135 ntBASIC3.76□□□□□ -1.81
SMARCA5O60264 MIR186-201ENST00000384988 86 ntBASIC3.76□□□□□ -1.81
SMARCA5O60264 U3.19-201ENST00000390893 196 ntBASIC3.76□□□□□ -1.81
SMARCA5O60264 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.76□□□□□ -1.81
SMARCA5O60264 EIF4EP4-201ENST00000424916 578 ntBASIC3.76□□□□□ -1.81
SMARCA5O60264 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.76□□□□□ -1.81
SMARCA5O60264 RN7SL75P-201ENST00000461926 281 ntBASIC3.76□□□□□ -1.81
SMARCA5O60264 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.76□□□□□ -1.81
SMARCA5O60264 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.76□□□□□ -1.81
SMARCA5O60264 SCARNA24.2-201ENST00000516968 130 ntBASIC3.76□□□□□ -1.81
SMARCA5O60264 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.76□□□□□ -1.81
SMARCA5O60264 MIR3944-201ENST00000581277 108 ntBASIC3.76□□□□□ -1.81
SMARCA5O60264 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.76□□□□□ -1.81
SMARCA5O60264 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SMARCA5O60264 AC093831.2-201ENST00000624393 3427 ntBASIC3.76□□□□□ -1.81
SMARCA5O60264 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SMARCA5O60264 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SMARCA5O60264 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMARCA5O60264 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
SMARCA5O60264 LINC02555-201ENST00000563933 1951 ntBASIC3.75□□□□□ -1.81
SMARCA5O60264 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.75□□□□□ -1.81
SMARCA5O60264 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SMARCA5O60264 RNU6-655P-201ENST00000362858 107 ntBASIC3.75□□□□□ -1.81
SMARCA5O60264 RNU6-1210P-201ENST00000363775 107 ntBASIC3.75□□□□□ -1.81
SMARCA5O60264 SNORA38.1-201ENST00000364172 131 ntBASIC3.75□□□□□ -1.81
SMARCA5O60264 RNU1-140P-201ENST00000365040 165 ntBASIC3.75□□□□□ -1.81
SMARCA5O60264 RNU6-187P-201ENST00000384139 106 ntBASIC3.75□□□□□ -1.81
SMARCA5O60264 RNY3P4-201ENST00000384428 101 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms