Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AP000787.2-201ENST00000604432 568 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 AC107294.3-201ENST00000609211 526 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXN1O15353 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
FOXN1O15353 AC009812.4-201ENST00000569134 1805 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 AC090740.1-201ENST00000623193 2262 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
FOXN1O15353 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.31□□□□□ -1.88
FOXN1O15353 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.31□□□□□ -1.88
FOXN1O15353 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.31□□□□□ -1.88
FOXN1O15353 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FOXN1O15353 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
FOXN1O15353 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
FOXN1O15353 MIR411-201ENST00000362239 96 ntBASIC3.31□□□□□ -1.88
FOXN1O15353 RNU6-1167P-201ENST00000363227 94 ntBASIC3.31□□□□□ -1.88
FOXN1O15353 Y_RNA.140-201ENST00000363474 103 ntBASIC3.31□□□□□ -1.88
FOXN1O15353 RNU6-682P-201ENST00000363843 106 ntBASIC3.31□□□□□ -1.88
FOXN1O15353 SNORD113-1-201ENST00000365321 69 ntBASIC3.31□□□□□ -1.88
FOXN1O15353 RNU6-102P-201ENST00000384485 104 ntBASIC3.31□□□□□ -1.88
FOXN1O15353 RNU4-53P-201ENST00000410828 140 ntBASIC3.31□□□□□ -1.88
FOXN1O15353 AL117339.3-201ENST00000418733 162 ntBASIC3.31□□□□□ -1.88
FOXN1O15353 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXN1O15353 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.31□□□□□ -1.88
FOXN1O15353 AL445305.1-201ENST00000432577 575 ntBASIC3.31□□□□□ -1.88
FOXN1O15353 VDAC1P3-201ENST00000434069 851 ntBASIC3.31□□□□□ -1.88
FOXN1O15353 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.31□□□□□ -1.88
FOXN1O15353 snoU13.4-201ENST00000458916 104 ntBASIC3.31□□□□□ -1.88
FOXN1O15353 RN7SKP210-201ENST00000459176 261 ntBASIC3.31□□□□□ -1.88
FOXN1O15353 RNU6-612P-201ENST00000516909 102 ntBASIC3.31□□□□□ -1.88
FOXN1O15353 AC023824.2-201ENST00000566185 400 ntBASIC3.31□□□□□ -1.88
FOXN1O15353 FAM60BP-201ENST00000578364 658 ntBASIC3.31□□□□□ -1.88
FOXN1O15353 AC012531.5-201ENST00000611375 151 ntBASIC3.31□□□□□ -1.88
FOXN1O15353 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXN1O15353 GABRG2-229ENST00000641017 3628 ntBASIC3.31□□□□□ -1.88
FOXN1O15353 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FOXN1O15353 HAUS6P2-201ENST00000433254 2404 ntBASIC3.31□□□□□ -1.88
FOXN1O15353 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.3□□□□□ -1.88
FOXN1O15353 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.3□□□□□ -1.88
FOXN1O15353 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXN1O15353 SNORD113-8-201ENST00000363497 74 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 Y_RNA.796-201ENST00000364268 102 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 Y_RNA.799-201ENST00000364992 102 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 RNU6-937P-201ENST00000384325 106 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 RNY3P4-201ENST00000384428 101 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 MIR181A2-201ENST00000384863 110 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 HSPE1P26-201ENST00000405341 275 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 MTCYBP2-201ENST00000407745 171 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 RNU2-37P-201ENST00000410695 177 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 RPL21P66-201ENST00000426566 466 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 AC244505.4-201ENST00000434905 287 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 AC098831.1-201ENST00000440661 216 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 SSXP5-201ENST00000443473 287 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 RPS29P27-201ENST00000463711 170 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 AK3P2-201ENST00000507976 429 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 RNU6-1053P-201ENST00000515930 101 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 RNU6-861P-201ENST00000516745 106 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.3□□□□□ -1.88
FOXN1O15353 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.3□□□□□ -1.88
FOXN1O15353 AC010186.2-204ENST00000537668 439 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.3□□□□□ -1.88
FOXN1O15353 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.3□□□□□ -1.88
FOXN1O15353 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 AL161798.1-201ENST00000604630 131 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 Y_RNA.772-201ENST00000606692 102 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 U2.14-201ENST00000615943 113 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 AC240442.1-201ENST00000616055 283 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 AC090617.7-201ENST00000623952 126 ntBASIC3.3□□□□□ -1.88
FOXN1O15353 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
FOXN1O15353 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXN1O15353 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
FOXN1O15353 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
FOXN1O15353 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
FOXN1O15353 AL359854.1-201ENST00000614203 1594 ntBASIC3.29□□□□□ -1.88
FOXN1O15353 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
FOXN1O15353 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
FOXN1O15353 MIR412-201ENST00000362142 91 ntBASIC3.29□□□□□ -1.88
FOXN1O15353 RNU6-600P-201ENST00000362524 99 ntBASIC3.29□□□□□ -1.88
FOXN1O15353 RNU6-428P-201ENST00000362942 107 ntBASIC3.29□□□□□ -1.88
FOXN1O15353 SNORD114-30-201ENST00000364448 72 ntBASIC3.29□□□□□ -1.88
FOXN1O15353 AL138827.1-201ENST00000402666 306 ntBASIC3.29□□□□□ -1.88
FOXN1O15353 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.29□□□□□ -1.88
FOXN1O15353 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.29□□□□□ -1.88
FOXN1O15353 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.29□□□□□ -1.88
FOXN1O15353 AL591043.1-201ENST00000432461 424 ntBASIC3.29□□□□□ -1.88
FOXN1O15353 TMSB4XP3-201ENST00000445144 114 ntBASIC3.29□□□□□ -1.88
FOXN1O15353 AL353705.4-201ENST00000449661 238 ntBASIC3.29□□□□□ -1.88
FOXN1O15353 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.29□□□□□ -1.88
FOXN1O15353 AL049874.1-201ENST00000489560 388 ntBASIC3.29□□□□□ -1.88
FOXN1O15353 MLLT10P2-201ENST00000506434 249 ntBASIC3.29□□□□□ -1.88
FOXN1O15353 RNU6-496P-201ENST00000516145 99 ntBASIC3.29□□□□□ -1.88
FOXN1O15353 SNORA31.8-201ENST00000516327 108 ntBASIC3.29□□□□□ -1.88
FOXN1O15353 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.29□□□□□ -1.88
FOXN1O15353 AC084851.1-201ENST00000529105 249 ntBASIC3.29□□□□□ -1.88
FOXN1O15353 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.29□□□□□ -1.88
FOXN1O15353 AC104581.2-201ENST00000572227 430 ntBASIC3.29□□□□□ -1.88
FOXN1O15353 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.29□□□□□ -1.88
FOXN1O15353 AL161629.2-201ENST00000615347 275 ntBASIC3.29□□□□□ -1.88
FOXN1O15353 AC011476.5-201ENST00000615594 130 ntBASIC3.29□□□□□ -1.88
FOXN1O15353 CTSLP2-204ENST00000629029 392 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms