Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 RNU6-586P-201ENST00000517265 104 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 CR383656.8-201ENST00000549046 145 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 AL355375.2-201ENST00000574825 175 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 MIR4287-201ENST00000579398 78 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 MIR4795-201ENST00000584182 89 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 AC243960.4-201ENST00000600532 288 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 AC025253.1-201ENST00000613623 543 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 AC084781.2-201ENST00000615568 161 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 SCARNA4-202ENST00000625402 129 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 MTND4LP32-201ENST00000636111 270 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 AC241585.2-209ENST00000638217 143 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 AC009487.4-201ENST00000624969 3585 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 Y_RNA.48-201ENST00000362710 103 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 Y_RNA.67-201ENST00000362870 100 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 RNU6-1159P-201ENST00000362933 107 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 RNU6-1009P-201ENST00000390996 107 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 U3.40-201ENST00000408706 208 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 RNU6-293P-201ENST00000411259 106 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 USP9YP30-201ENST00000430729 455 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 HMGN2P3-201ENST00000433603 273 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 HMGN2P5-201ENST00000436882 273 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 AC243964.1-201ENST00000441814 261 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 AC013470.1-201ENST00000453438 462 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 RPL30P12-201ENST00000474666 353 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 AK3P2-201ENST00000507976 429 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 RNU2-53P-201ENST00000516257 147 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 Y_RNA.691-201ENST00000516611 103 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 AC087854.1-201ENST00000519706 414 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 AC026371.1-201ENST00000551867 419 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 MIR4524B-201ENST00000581569 115 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 C8orf59P2-201ENST00000603441 271 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 MIR6128-201ENST00000615528 109 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 AC104985.2-201ENST00000620598 500 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 SDR42E1P4-201ENST00000620894 481 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TRIM49BA6NDI0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 Y_RNA.419-201ENST00000384041 102 ntBASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 SNORA36A-201ENST00000384221 132 ntBASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 Y_RNA.509-201ENST00000384506 99 ntBASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 SNORD116-29-201ENST00000384516 83 ntBASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 RNU6-510P-201ENST00000391239 108 ntBASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 MTND4LP16-201ENST00000440828 295 ntBASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 RPS29P27-201ENST00000463711 170 ntBASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 FO393415.2-201ENST00000480085 343 ntBASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 RPL7P42-201ENST00000481005 679 ntBASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 AC034114.1-201ENST00000520293 285 ntBASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 AL670379.2-201ENST00000604983 252 ntBASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 uc_338.5-201ENST00000611839 155 ntBASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 AL359697.1-201ENST00000624879 587 ntBASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 MTND4P23-201ENST00000447723 1363 ntBASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 AC008555.8-201ENST00000623602 2168 ntBASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
TRIM49BA6NDI0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 Y_RNA.263-201ENST00000364659 114 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 Y_RNA.404-201ENST00000383978 102 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 RNU6-842P-201ENST00000384269 107 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 MIR186-201ENST00000384988 86 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 MIR517A-201ENST00000385001 87 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 HMGN2P39-201ENST00000398005 273 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 RNU6-370P-201ENST00000411008 104 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 AL030996.1-201ENST00000411430 235 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 AC007969.2-201ENST00000441891 191 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 RNA5SP233-201ENST00000459153 113 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 RN7SL274P-201ENST00000492268 272 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 RPS29P11-201ENST00000496507 171 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 Y_RNA.670-201ENST00000516255 105 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 AC069113.1-201ENST00000517763 267 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 APOOP3-201ENST00000536787 586 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 AC005668.1-201ENST00000571142 476 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 AC063943.3-201ENST00000615562 356 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 AC022140.2-201ENST00000623500 188 ntBASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
TRIM49BA6NDI0 RNU6-529P-201ENST00000363383 104 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 RNU6-527P-201ENST00000363425 104 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms