Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 SNORA77B-201ENST00000578179 125 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.5□□□□□ -2.17
CLRN2A0PK11 AL603755.1-201ENST00000619504 163 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 AC068205.3-201ENST00000636385 468 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.5□□□□□ -2.17
CLRN2A0PK11 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CLRN2A0PK11 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.5□□□□□ -2.17
CLRN2A0PK11 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 RNU6-552P-201ENST00000362869 119 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 Y_RNA.169-201ENST00000363745 96 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 RNU6-266P-201ENST00000364225 107 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 RNU5A-2P-201ENST00000384337 116 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 RNU6-1127P-201ENST00000384580 107 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 MIR520A-201ENST00000384862 85 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 MIR150-201ENST00000385048 84 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 RNU2-41P-201ENST00000410991 178 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.49□□□□□ -2.17
CLRN2A0PK11 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.49□□□□□ -2.17
CLRN2A0PK11 PIGFP2-201ENST00000421400 651 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 JTBP1-201ENST00000441314 247 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.49□□□□□ -2.17
CLRN2A0PK11 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.49□□□□□ -2.17
CLRN2A0PK11 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.49□□□□□ -2.17
CLRN2A0PK11 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.49□□□□□ -2.17
CLRN2A0PK11 MTCO2P6-201ENST00000463134 685 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 RPS29P1-201ENST00000465274 159 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 RPL9P9-202ENST00000466501 579 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 AC098862.1-201ENST00000504991 413 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.49□□□□□ -2.17
CLRN2A0PK11 AC079140.5-201ENST00000507882 310 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 SNORD60.2-201ENST00000516883 86 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.49□□□□□ -2.17
CLRN2A0PK11 MIR3913-1-201ENST00000577744 102 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.49□□□□□ -2.17
CLRN2A0PK11 AC078795.3-201ENST00000602913 472 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 AC073413.2-201ENST00000604332 360 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 AC069114.2-201ENST00000604699 304 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CLRN2A0PK11 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 MIR6515-201ENST00000619843 57 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 AC009161.2-201ENST00000624626 138 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 ICE2P2-201ENST00000483823 2787 ntBASIC1.49□□□□□ -2.17
CLRN2A0PK11 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CLRN2A0PK11 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.48□□□□□ -2.17
CLRN2A0PK11 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CLRN2A0PK11 MTND5P10-201ENST00000603719 1809 ntBASIC1.48□□□□□ -2.17
CLRN2A0PK11 MIR340-201ENST00000362125 95 ntBASIC1.48□□□□□ -2.17
CLRN2A0PK11 RNU6-360P-201ENST00000390944 104 ntBASIC1.48□□□□□ -2.17
CLRN2A0PK11 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
CLRN2A0PK11 RNA5SP201-201ENST00000410316 124 ntBASIC1.48□□□□□ -2.17
CLRN2A0PK11 RPL30P13-201ENST00000418873 348 ntBASIC1.48□□□□□ -2.17
CLRN2A0PK11 AC007098.1-201ENST00000420122 367 ntBASIC1.48□□□□□ -2.17
CLRN2A0PK11 HSPE1P9-201ENST00000440046 311 ntBASIC1.48□□□□□ -2.17
CLRN2A0PK11 AC013470.1-201ENST00000453438 462 ntBASIC1.48□□□□□ -2.17
CLRN2A0PK11 SNRPFP3-201ENST00000457792 225 ntBASIC1.48□□□□□ -2.17
CLRN2A0PK11 RPS26P55-201ENST00000471178 356 ntBASIC1.48□□□□□ -2.17
CLRN2A0PK11 RPL26P26-201ENST00000480251 434 ntBASIC1.48□□□□□ -2.17
CLRN2A0PK11 AC016632.1-201ENST00000503994 196 ntBASIC1.48□□□□□ -2.17
CLRN2A0PK11 AC069113.1-201ENST00000517763 267 ntBASIC1.48□□□□□ -2.17
CLRN2A0PK11 AC012414.6-201ENST00000568241 401 ntBASIC1.48□□□□□ -2.17
CLRN2A0PK11 AC083806.3-201ENST00000614016 455 ntBASIC1.48□□□□□ -2.17
CLRN2A0PK11 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CLRN2A0PK11 AL121890.5-201ENST00000620848 304 ntBASIC1.48□□□□□ -2.17
CLRN2A0PK11 AL159152.1-201ENST00000635019 2587 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 MIR26B-201ENST00000362251 77 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 SNORD32A-201ENST00000364805 84 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.47□□□□□ -2.17
CLRN2A0PK11 RNU6-378P-201ENST00000384324 107 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 RNU6-1026P-201ENST00000384465 108 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 AL117339.3-201ENST00000418733 162 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 MTND2P9-201ENST00000422293 931 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 AL358934.1-201ENST00000432346 324 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 AC099513.1-201ENST00000490423 301 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.47□□□□□ -2.17
CLRN2A0PK11 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.47□□□□□ -2.17
CLRN2A0PK11 SNORA25.17-201ENST00000517184 124 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 RRN3P3-201ENST00000549207 578 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 AL137100.2-201ENST00000555786 315 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 AC021231.3-201ENST00000558497 370 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 AGGF1P4-201ENST00000568249 801 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 AC040904.1-201ENST00000590850 223 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 RNU6-85P-201ENST00000605989 107 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 PCGEM1.1-201ENST00000613431 131 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 MIR6767-201ENST00000637302 66 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 AC100821.1-201ENST00000523153 2479 ntBASIC1.47□□□□□ -2.17
CLRN2A0PK11 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.47□□□□□ -2.17
CLRN2A0PK11 SNORD114-26-201ENST00000363543 72 ntBASIC1.46□□□□□ -2.18
CLRN2A0PK11 SNORD31B-201ENST00000364977 69 ntBASIC1.46□□□□□ -2.18
CLRN2A0PK11 MIR208B-201ENST00000401172 77 ntBASIC1.46□□□□□ -2.18
CLRN2A0PK11 RPS29P13-201ENST00000402041 169 ntBASIC1.46□□□□□ -2.18
CLRN2A0PK11 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.46□□□□□ -2.18
CLRN2A0PK11 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.46□□□□□ -2.18
CLRN2A0PK11 AL133396.1-201ENST00000432048 687 ntBASIC1.46□□□□□ -2.18
CLRN2A0PK11 AL445567.1-201ENST00000439121 144 ntBASIC1.46□□□□□ -2.18
CLRN2A0PK11 ATP5J2P3-201ENST00000451550 258 ntBASIC1.46□□□□□ -2.18
CLRN2A0PK11 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.46□□□□□ -2.18
CLRN2A0PK11 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms