Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 MIR378A-201ENST00000362177 66 ntBASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 RNU6-1252P-201ENST00000363054 104 ntBASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 RNU6-142P-201ENST00000384019 107 ntBASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 MIR181A1-201ENST00000385026 110 ntBASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 MTCYBP2-201ENST00000407745 171 ntBASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 MTND3P9-201ENST00000429526 346 ntBASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 PPP1R2P5-201ENST00000457256 603 ntBASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 AC005741.1-201ENST00000511094 432 ntBASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 RNU6-1332P-201ENST00000516666 104 ntBASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 AC109635.3-201ENST00000529536 185 ntBASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 AC008749.1-201ENST00000597650 306 ntBASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 SNRPGP17-201ENST00000603780 214 ntBASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 AC004492.1-201ENST00000607036 742 ntBASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SMIM28A0A1B0GU29 AC092268.1-201ENST00000342691 405 ntBASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 Y_RNA.595-201ENST00000410403 105 ntBASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 RNU6-325P-201ENST00000411132 105 ntBASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 AP1B1P2-201ENST00000416196 106 ntBASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 ARL5AP1-201ENST00000418991 388 ntBASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 AC096920.1-201ENST00000423991 241 ntBASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 AC078809.1-201ENST00000427601 140 ntBASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 USP9YP28-201ENST00000435142 589 ntBASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 AL353689.1-201ENST00000438895 199 ntBASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 AC016632.1-201ENST00000503994 196 ntBASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 AC021146.2-201ENST00000504736 556 ntBASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 AC025465.4-201ENST00000513422 638 ntBASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 SCOCP1-201ENST00000554676 349 ntBASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 AC026271.5-201ENST00000577873 130 ntBASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 BX248123.2-201ENST00000606318 124 ntBASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 AC005296.1-201ENST00000616145 209 ntBASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 AL359314.1-201ENST00000616913 261 ntBASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SMIM28A0A1B0GU29 CENPCP1-201ENST00000533085 2578 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 RNU6-254P-201ENST00000363377 107 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 RNU6-1164P-201ENST00000364428 107 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 Y_RNA.450-201ENST00000384198 113 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 RNU6-378P-201ENST00000384324 107 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 SNORD14D-201ENST00000384390 87 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 RNU6-1215P-201ENST00000384441 102 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 MIR517C-201ENST00000385103 95 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 BTF3L4P2-201ENST00000392798 346 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 MIR1323-201ENST00000408090 73 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 MIR548F1-201ENST00000408667 84 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 RNU6-1148P-201ENST00000410992 104 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 CBX3P6-201ENST00000430257 527 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 MTCYBP18-201ENST00000501056 747 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 AC093259.1-201ENST00000509755 300 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 PTP4A1P4-201ENST00000512479 322 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 MTND1P35-201ENST00000526739 508 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 AL356157.2-201ENST00000605122 111 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 AC090517.2-201ENST00000614966 680 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 AC090617.10-201ENST00000624308 134 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 ZNF702P-202ENST00000434269 1966 ntBASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
SMIM28A0A1B0GU29 RNA5SP276-201ENST00000362580 94 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 RNY4P14-201ENST00000363656 96 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 SNORD113-7-201ENST00000363762 77 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 RNU4-12P-201ENST00000365233 139 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 Y_RNA.373-201ENST00000365600 103 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 Y_RNA.402-201ENST00000383972 102 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 MIR597-201ENST00000384968 97 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 MIR676-201ENST00000390702 67 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 SNORA67.6-201ENST00000391093 99 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 RNU6-332P-201ENST00000391193 108 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 MTCO1P21-201ENST00000416634 589 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 AL590556.1-201ENST00000423231 483 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 AL590632.1-201ENST00000424289 371 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 MTCO3P18-201ENST00000440206 761 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 snoU13.6-201ENST00000458785 104 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 RNU7-187P-201ENST00000458985 68 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 RNU6-1037P-201ENST00000459571 107 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 ATP5EP1-201ENST00000510257 156 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms