Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 RNU6-1080P-201ENST00000383982 107 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU6-1235P-201ENST00000384559 107 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 RNA5SP467-201ENST00000391274 118 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 Y_RNA.608-201ENST00000410647 95 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU2-8P-201ENST00000410727 190 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 AC090960.1-201ENST00000421072 306 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 AC012306.1-201ENST00000423267 114 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 TIMM9P3-201ENST00000428659 274 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 MTCO3P18-201ENST00000440206 761 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 AL031313.1-201ENST00000448435 256 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU6-498P-201ENST00000459468 107 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 BET1P1-201ENST00000482276 359 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 RPS26P48-201ENST00000491713 339 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 MTCO3P7-201ENST00000510008 774 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU6-948P-201ENST00000516374 107 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU6-1178P-201ENST00000516674 107 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU6-1220P-201ENST00000517126 108 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 AC022616.3-201ENST00000523940 148 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 AL390123.1-201ENST00000603216 237 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 AL031281.1-201ENST00000604049 488 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 GHRLOS.1-201ENST00000610995 70 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 AC005858.4-201ENST00000623191 700 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 SNORD3E-202ENST00000627253 216 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 SNORA43.4-201ENST00000629559 138 ntBASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
TRAV12-1A0A0B4J245 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 SNORD18A-201ENST00000363753 72 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 Y_RNA.287-201ENST00000364853 94 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 SNORA80D-201ENST00000384488 135 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU6-83P-201ENST00000384568 112 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 MIR634-201ENST00000385208 97 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 RNA5SP213-201ENST00000391031 106 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU6-550P-201ENST00000391057 101 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 RNA5SP323-201ENST00000391094 133 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU6-1093P-201ENST00000391194 107 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 AL031274.1-201ENST00000450334 232 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 AC010486.2-201ENST00000505572 483 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 LRRC34P2-201ENST00000514850 553 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU6-1146P-201ENST00000516282 102 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 SCARNA24.1-201ENST00000516465 137 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU6-1069P-201ENST00000516612 133 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 AC024995.1-201ENST00000523014 93 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 AC103996.1-201ENST00000555468 102 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 AC091805.2-201ENST00000603848 235 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 AL353765.1-201ENST00000605514 183 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 AL136221.1-201ENST00000621449 509 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 AC006001.4-201ENST00000622243 395 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 AL603839.4-201ENST00000624658 1005 ntBASIC0.35□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU6-110P-201ENST00000384508 104 ntBASIC0.34□□□□□ -2.36
TRAV12-1A0A0B4J245 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAV12-1A0A0B4J245 AC005840.1-201ENST00000498412 377 ntBASIC0.34□□□□□ -2.36
TRAV12-1A0A0B4J245 AK3P2-201ENST00000507976 429 ntBASIC0.34□□□□□ -2.36
TRAV12-1A0A0B4J245 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.34□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU6-947P-201ENST00000516264 106 ntBASIC0.34□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU4-54P-201ENST00000516428 129 ntBASIC0.34□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU6-113P-201ENST00000516653 101 ntBASIC0.34□□□□□ -2.36
TRAV12-1A0A0B4J245 AL158827.2-201ENST00000602494 330 ntBASIC0.34□□□□□ -2.36
TRAV12-1A0A0B4J245 Z99497.2-201ENST00000603634 310 ntBASIC0.34□□□□□ -2.36
TRAV12-1A0A0B4J245 AC080078.2-201ENST00000603766 501 ntBASIC0.34□□□□□ -2.36
TRAV12-1A0A0B4J245 AP001836.1-201ENST00000604675 523 ntBASIC0.34□□□□□ -2.36
TRAV12-1A0A0B4J245 AL157392.4-201ENST00000609756 345 ntBASIC0.34□□□□□ -2.36
TRAV12-1A0A0B4J245 AC107308.1-201ENST00000615897 301 ntBASIC0.34□□□□□ -2.36
TRAV12-1A0A0B4J245 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.34□□□□□ -2.36
TRAV12-1A0A0B4J245 AL691447.3-201ENST00000635020 330 ntBASIC0.34□□□□□ -2.36
TRAV12-1A0A0B4J245 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU6-827P-201ENST00000365553 106 ntBASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU6-975P-201ENST00000384296 105 ntBASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 Y_RNA.500-201ENST00000384466 111 ntBASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 MIR549A-201ENST00000385268 96 ntBASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 SNORD41-201ENST00000386967 70 ntBASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 SNORA40.4-201ENST00000390971 128 ntBASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 RN7SKP200-201ENST00000410564 320 ntBASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 SRRM1P2-201ENST00000464531 1192 ntBASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 HMGB1P29-201ENST00000505659 499 ntBASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 RNA5SP121-201ENST00000516537 101 ntBASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 APOOP3-201ENST00000536787 586 ntBASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 AC004812.1-201ENST00000540773 146 ntBASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 AC022217.4-201ENST00000604389 163 ntBASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 AC009229.3-201ENST00000608056 282 ntBASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 AC116165.2-201ENST00000616705 206 ntBASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 AC009159.2-201ENST00000617603 606 ntBASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 MIR8054-201ENST00000620877 86 ntBASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 AC138649.3-201ENST00000622154 254 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms