Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SEM1P1-201ENST00000506694 209 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 MRPS36P2-201ENST00000512569 299 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 AC008885.1-201ENST00000514930 301 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 AC068657.1-201ENST00000520807 306 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 CYP4A27P-201ENST00000567218 190 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 AC090617.3-201ENST00000573670 475 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 MIR3923-201ENST00000579521 83 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 Z98751.3-201ENST00000604447 521 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 MIR622-201ENST00000638396 96 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 Z75746.1-201ENST00000440243 2080 ntBASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-874P-201ENST00000362390 105 ntBASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-1210P-201ENST00000363775 107 ntBASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 Y_RNA.307-201ENST00000365022 117 ntBASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-708P-201ENST00000384217 107 ntBASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 SNORA36A-201ENST00000384221 132 ntBASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-541P-201ENST00000384709 110 ntBASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 AIMP1P2-201ENST00000425294 312 ntBASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 RPS29P12-201ENST00000460178 152 ntBASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 TOMM22P6-201ENST00000465035 409 ntBASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 SNORA31.6-201ENST00000516241 130 ntBASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 Y_RNA.715-201ENST00000517082 110 ntBASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 AC040926.1-201ENST00000530195 238 ntBASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 AC008739.2-201ENST00000597006 317 ntBASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 RPS29P30-201ENST00000600975 111 ntBASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 RPL12P50-201ENST00000603116 116 ntBASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 AC002064.3-201ENST00000623448 346 ntBASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHB1Q9Y5F3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-486P-201ENST00000363116 107 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 Y_RNA.152-201ENST00000363578 100 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-301P-201ENST00000384277 107 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 SNORD15B-201ENST00000384714 146 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 RPL21P1-201ENST00000399532 476 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 MTCO3P8-201ENST00000453691 755 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 AC091179.1-201ENST00000461606 579 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-397P-201ENST00000516226 104 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 Y_RNA.668-201ENST00000516233 93 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 SNORA31.16-201ENST00000516773 139 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 RNA5SP54-201ENST00000516951 92 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 AC245166.1-201ENST00000521012 253 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 UBL5P2-201ENST00000583788 219 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 AL078605.1-201ENST00000603529 500 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 AL355297.3-201ENST00000604082 446 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 AL034555.1-201ENST00000604816 211 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 RAC1P9-201ENST00000604990 392 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 AL021879.1-201ENST00000611756 288 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 AC010329.5-201ENST00000623497 2174 ntBASIC3.09□□□□□ -1.91
PCDHB1Q9Y5F3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PCDHB1Q9Y5F3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
PCDHB1Q9Y5F3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 Y_RNA.40-201ENST00000362645 93 ntBASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 SNORD115-8-201ENST00000363856 82 ntBASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 RNU4-50P-201ENST00000364361 141 ntBASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 SNORD115-38-201ENST00000365037 82 ntBASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 RNU6-472P-201ENST00000384299 107 ntBASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 CBX3P9-201ENST00000402326 552 ntBASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 MIR1252-201ENST00000408861 65 ntBASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 ELOCP20-201ENST00000422460 345 ntBASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 USP9YP16-201ENST00000430287 407 ntBASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 USP9YP23-201ENST00000455085 407 ntBASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 AL121594.1-201ENST00000475906 575 ntBASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 SCARNA17.1-201ENST00000516211 143 ntBASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 RNU2-53P-201ENST00000516257 147 ntBASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 SCARNA17.2-201ENST00000516334 143 ntBASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 Y_RNA.680-201ENST00000516441 93 ntBASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 AC103810.1-201ENST00000579873 453 ntBASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 AC005520.5-201ENST00000613926 164 ntBASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 SCARNA17.4-201ENST00000614296 143 ntBASIC3.08□□□□□ -1.92
PCDHB1Q9Y5F3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 AC026241.1-201ENST00000517873 2142 ntBASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms