Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 RNA5SP317-201ENST00000410176 116 ntBASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 RNA5SP311-201ENST00000411290 116 ntBASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 AL356095.1-201ENST00000417217 199 ntBASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 RPL23AP62-201ENST00000463396 453 ntBASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 HMGB3P3-201ENST00000510526 400 ntBASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 MRPS36P2-201ENST00000512569 299 ntBASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 SCARNA17.1-201ENST00000516211 143 ntBASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 SCARNA17.2-201ENST00000516334 143 ntBASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 RNA5SP315-201ENST00000516340 116 ntBASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 RNA5SP312-201ENST00000517068 116 ntBASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 AP005660.1-201ENST00000522972 293 ntBASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 SCARNA17.4-201ENST00000614296 143 ntBASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 AC002064.3-201ENST00000623448 346 ntBASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 AC090517.3-201ENST00000625170 141 ntBASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 AC021753.1-201ENST00000635724 168 ntBASIC3.35□□□□□ -1.87
SF3B6Q9Y3B4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 GABRG2-229ENST00000641017 3628 ntBASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 RNA5SP130-201ENST00000364431 114 ntBASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 SNORA67.2-201ENST00000384300 149 ntBASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 Y_RNA.506-201ENST00000384494 102 ntBASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 RNU6-1278P-201ENST00000516130 107 ntBASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 AC103810.1-201ENST00000579873 453 ntBASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 AC008739.2-201ENST00000597006 317 ntBASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 AC110079.1-202ENST00000635213 138 ntBASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 U6.106-201ENST00000636360 105 ntBASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 U2.22-201ENST00000636441 106 ntBASIC3.34□□□□□ -1.87
SF3B6Q9Y3B4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SF3B6Q9Y3B4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 AL157777.2-201ENST00000258070 137 ntBASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 RNU6-653P-201ENST00000363074 106 ntBASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 RNU1-13P-201ENST00000384499 162 ntBASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 RNU6-125P-201ENST00000384505 107 ntBASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 RNU6-1248P-201ENST00000391096 64 ntBASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 AL031003.1-201ENST00000404229 172 ntBASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 AL392103.1-201ENST00000447000 198 ntBASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 Y_RNA.637-201ENST00000459424 114 ntBASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 RNU6-1219P-201ENST00000516143 112 ntBASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 RNU6-789P-201ENST00000517105 102 ntBASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 AL020997.2-201ENST00000602607 184 ntBASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 MIR6867-201ENST00000610636 67 ntBASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 UCA1.1-201ENST00000620952 75 ntBASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SF3B6Q9Y3B4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 SNORD115-30-201ENST00000364117 82 ntBASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 RNA5SP42-201ENST00000364278 115 ntBASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 SNORD32B-201ENST00000364460 84 ntBASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 RPL21P65-201ENST00000406094 466 ntBASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 AC006989.1-201ENST00000427212 131 ntBASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 AL135790.2-201ENST00000437701 267 ntBASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 AC140059.1-201ENST00000489238 361 ntBASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 AC093663.1-201ENST00000497190 394 ntBASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 RN7SKP21-201ENST00000516503 220 ntBASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 Y_RNA.703-201ENST00000516846 111 ntBASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 MRPS18CP4-201ENST00000535821 231 ntBASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 MIR3160-1-201ENST00000577972 85 ntBASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 MIR4286-201ENST00000580651 93 ntBASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SF3B6Q9Y3B4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms