Protein–RNA interactions for Protein: Q9NYG2

ZDHHC3, Palmitoyltransferase ZDHHC3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3Q9NYG2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ZDHHC3Q9NYG2 AL670379.2-201ENST00000604983 252 ntBASIC4.03□□□□□ -1.76
ZDHHC3Q9NYG2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.03□□□□□ -1.76
ZDHHC3Q9NYG2 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ZDHHC3Q9NYG2 AC069528.2-201ENST00000624849 1991 ntBASIC4.03□□□□□ -1.76
ZDHHC3Q9NYG2 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 SNORD45.3-201ENST00000363836 72 ntBASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 SNORA70.2-201ENST00000364506 135 ntBASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 SNORA22-201ENST00000383907 134 ntBASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 RNY3P5-201ENST00000384127 102 ntBASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 Y_RNA.584-201ENST00000391090 114 ntBASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 RNU4-43P-201ENST00000410628 137 ntBASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 AC245291.1-201ENST00000419501 328 ntBASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 RBMY2UP-201ENST00000453474 324 ntBASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 RNU5E-3P-201ENST00000515913 68 ntBASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 Y_RNA.712-201ENST00000517011 92 ntBASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 Y_RNA.757-201ENST00000578934 114 ntBASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 RNU1-30P-201ENST00000606575 163 ntBASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 CENPCP1-201ENST00000533085 2578 ntBASIC4.02□□□□□ -1.77
ZDHHC3Q9NYG2 AC010889.1-201ENST00000566193 2666 ntBASIC4.01□□□□□ -1.77
ZDHHC3Q9NYG2 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.01□□□□□ -1.77
ZDHHC3Q9NYG2 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ZDHHC3Q9NYG2 AC010733.2-201ENST00000589496 5702 ntBASIC4.01□□□□□ -1.77
ZDHHC3Q9NYG2 SNORA25.7-201ENST00000364375 127 ntBASIC4.01□□□□□ -1.77
ZDHHC3Q9NYG2 RNA5SP130-201ENST00000364431 114 ntBASIC4.01□□□□□ -1.77
ZDHHC3Q9NYG2 AL356095.1-201ENST00000417217 199 ntBASIC4.01□□□□□ -1.77
ZDHHC3Q9NYG2 AL158823.1-201ENST00000418441 478 ntBASIC4.01□□□□□ -1.77
ZDHHC3Q9NYG2 AC112771.1-201ENST00000463581 102 ntBASIC4.01□□□□□ -1.77
ZDHHC3Q9NYG2 RPL30P14-201ENST00000482744 348 ntBASIC4.01□□□□□ -1.77
ZDHHC3Q9NYG2 RNU1-61P-201ENST00000516107 151 ntBASIC4.01□□□□□ -1.77
ZDHHC3Q9NYG2 AC023043.3-201ENST00000593113 385 ntBASIC4.01□□□□□ -1.77
ZDHHC3Q9NYG2 AC120024.3-201ENST00000603167 156 ntBASIC4.01□□□□□ -1.77
ZDHHC3Q9NYG2 AC087190.4-201ENST00000574616 8334 ntBASIC4.01□□□□□ -1.77
ZDHHC3Q9NYG2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ZDHHC3Q9NYG2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.01□□□□□ -1.77
ZDHHC3Q9NYG2 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
ZDHHC3Q9NYG2 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
ZDHHC3Q9NYG2 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 AC026241.1-201ENST00000517873 2142 ntBASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 AP002088.1-201ENST00000382740 395 ntBASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 AL591034.1-201ENST00000407447 340 ntBASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 AC069285.2-201ENST00000440210 275 ntBASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 AL358232.1-201ENST00000448030 501 ntBASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 RN7SL385P-201ENST00000468873 276 ntBASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 RNU6-772P-201ENST00000516042 105 ntBASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 PARP1P2-201ENST00000556806 195 ntBASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 MIR4679-2-201ENST00000578358 77 ntBASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 MIR6867-201ENST00000610636 67 ntBASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 SNX18P1Y-201ENST00000616231 511 ntBASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 AC112484.5-201ENST00000624189 228 ntBASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
ZDHHC3Q9NYG2 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 RNU6-1255P-201ENST00000363434 112 ntBASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 RNU6-1336P-201ENST00000383886 109 ntBASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 RNU1-57P-201ENST00000384491 166 ntBASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 MIR1251-201ENST00000408552 70 ntBASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 RNA5SP317-201ENST00000410176 116 ntBASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 RNA5SP311-201ENST00000411290 116 ntBASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 AC016925.1-201ENST00000458303 298 ntBASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 RN7SL860P-201ENST00000473738 223 ntBASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 RNA5SP315-201ENST00000516340 116 ntBASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 RNU6-1337P-201ENST00000516525 95 ntBASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 RNA5SP312-201ENST00000517068 116 ntBASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 MIR3613-201ENST00000579844 87 ntBASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 MIR378D2-201ENST00000580636 98 ntBASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 MIR6868-201ENST00000611215 58 ntBASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 MIR6076-201ENST00000617521 113 ntBASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 MIR6810-201ENST00000622701 70 ntBASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 MTND5P32-201ENST00000560711 1802 ntBASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
ZDHHC3Q9NYG2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
ZDHHC3Q9NYG2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.98□□□□□ -1.77
ZDHHC3Q9NYG2 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms