Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
ATG3Q9NT62 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ATG3Q9NT62 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
ATG3Q9NT62 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG3Q9NT62 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ATG3Q9NT62 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG3Q9NT62 RNU6-153P-201ENST00000364422 104 ntBASIC4.19□□□□□ -1.74
ATG3Q9NT62 Y_RNA.262-201ENST00000364641 102 ntBASIC4.19□□□□□ -1.74
ATG3Q9NT62 RNU6-1175P-201ENST00000365200 107 ntBASIC4.19□□□□□ -1.74
ATG3Q9NT62 SNORA7.4-201ENST00000384249 137 ntBASIC4.19□□□□□ -1.74
ATG3Q9NT62 MIR569-201ENST00000385228 96 ntBASIC4.19□□□□□ -1.74
ATG3Q9NT62 MIR493-201ENST00000385254 89 ntBASIC4.19□□□□□ -1.74
ATG3Q9NT62 SNORA40C-201ENST00000391285 128 ntBASIC4.19□□□□□ -1.74
ATG3Q9NT62 AL591034.1-201ENST00000407447 340 ntBASIC4.19□□□□□ -1.74
ATG3Q9NT62 AF186996.7-201ENST00000492781 209 ntBASIC4.19□□□□□ -1.74
ATG3Q9NT62 HMGB3P3-201ENST00000510526 400 ntBASIC4.19□□□□□ -1.74
ATG3Q9NT62 RNU6-966P-201ENST00000516479 104 ntBASIC4.19□□□□□ -1.74
ATG3Q9NT62 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.19□□□□□ -1.74
ATG3Q9NT62 MIR5047-201ENST00000579212 100 ntBASIC4.19□□□□□ -1.74
ATG3Q9NT62 UBL5P2-201ENST00000583788 219 ntBASIC4.19□□□□□ -1.74
ATG3Q9NT62 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG3Q9NT62 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ATG3Q9NT62 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG3Q9NT62 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG3Q9NT62 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ATG3Q9NT62 AC009541.1-201ENST00000438279 2662 ntBASIC4.18□□□□□ -1.74
ATG3Q9NT62 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
ATG3Q9NT62 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ATG3Q9NT62 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.18□□□□□ -1.74
ATG3Q9NT62 AC002546.1-201ENST00000588041 2504 ntBASIC4.18□□□□□ -1.74
ATG3Q9NT62 RNU4-56P-201ENST00000364700 142 ntBASIC4.18□□□□□ -1.74
ATG3Q9NT62 Y_RNA.571-201ENST00000384753 98 ntBASIC4.18□□□□□ -1.74
ATG3Q9NT62 MIR184-201ENST00000384962 84 ntBASIC4.18□□□□□ -1.74
ATG3Q9NT62 MIR514A1-201ENST00000385133 98 ntBASIC4.18□□□□□ -1.74
ATG3Q9NT62 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.18□□□□□ -1.74
ATG3Q9NT62 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.18□□□□□ -1.74
ATG3Q9NT62 TOMM20P4-201ENST00000427861 435 ntBASIC4.18□□□□□ -1.74
ATG3Q9NT62 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.18□□□□□ -1.74
ATG3Q9NT62 AC096638.1-201ENST00000444678 216 ntBASIC4.18□□□□□ -1.74
ATG3Q9NT62 RPL23AP14-201ENST00000468281 468 ntBASIC4.18□□□□□ -1.74
ATG3Q9NT62 AC117440.1-201ENST00000474107 571 ntBASIC4.18□□□□□ -1.74
ATG3Q9NT62 RNU6-1114P-201ENST00000516022 107 ntBASIC4.18□□□□□ -1.74
ATG3Q9NT62 SNORA31.19-201ENST00000517079 126 ntBASIC4.18□□□□□ -1.74
ATG3Q9NT62 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.18□□□□□ -1.74
ATG3Q9NT62 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.18□□□□□ -1.74
ATG3Q9NT62 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.18□□□□□ -1.74
ATG3Q9NT62 RMST_6.1-201ENST00000611980 203 ntBASIC4.18□□□□□ -1.74
ATG3Q9NT62 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
ATG3Q9NT62 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
ATG3Q9NT62 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG3Q9NT62 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ATG3Q9NT62 AC017071.1-201ENST00000564407 2204 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.17□□□□□ -1.74
ATG3Q9NT62 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.17□□□□□ -1.74
ATG3Q9NT62 RNU6-78P-201ENST00000362897 107 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 RNU5E-7P-201ENST00000365290 117 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 RNU6-211P-201ENST00000384047 107 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 SNORA54-201ENST00000384281 123 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 MIR487A-201ENST00000385009 80 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 SNORA46.1-201ENST00000391069 153 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 BTF3L4P2-201ENST00000392798 346 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 MIR1290-201ENST00000408735 78 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 AL512844.2-201ENST00000433990 593 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.17□□□□□ -1.74
ATG3Q9NT62 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.17□□□□□ -1.74
ATG3Q9NT62 Z82210.1-201ENST00000440037 231 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 AC008267.6-201ENST00000441664 139 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.17□□□□□ -1.74
ATG3Q9NT62 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.17□□□□□ -1.74
ATG3Q9NT62 RPL23AP67-201ENST00000465341 474 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 AC021205.2-201ENST00000480069 347 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 AC010409.1-201ENST00000487382 476 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 RN7SKP49-201ENST00000516675 260 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 SUMO2P18-201ENST00000518873 252 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.17□□□□□ -1.74
ATG3Q9NT62 MIR5692C2-201ENST00000577959 77 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 snoU18.1-201ENST00000629629 71 ntBASIC4.17□□□□□ -1.74
ATG3Q9NT62 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.17□□□□□ -1.74
ATG3Q9NT62 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG3Q9NT62 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG3Q9NT62 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.17□□□□□ -1.74
ATG3Q9NT62 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATG3Q9NT62 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATG3Q9NT62 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.16□□□□□ -1.74
ATG3Q9NT62 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
ATG3Q9NT62 Y_RNA.218-201ENST00000364218 104 ntBASIC4.16□□□□□ -1.74
ATG3Q9NT62 Y_RNA.273-201ENST00000364703 102 ntBASIC4.16□□□□□ -1.74
ATG3Q9NT62 RNU6-968P-201ENST00000384076 107 ntBASIC4.16□□□□□ -1.74
ATG3Q9NT62 RNA5SP229-201ENST00000410809 99 ntBASIC4.16□□□□□ -1.74
ATG3Q9NT62 Z85995.1-201ENST00000415547 335 ntBASIC4.16□□□□□ -1.74
ATG3Q9NT62 POLR2KP2-201ENST00000438155 177 ntBASIC4.16□□□□□ -1.74
ATG3Q9NT62 AL353705.4-201ENST00000449661 238 ntBASIC4.16□□□□□ -1.74
ATG3Q9NT62 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.16□□□□□ -1.74
ATG3Q9NT62 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.16□□□□□ -1.74
ATG3Q9NT62 AC091874.1-201ENST00000511402 339 ntBASIC4.16□□□□□ -1.74
ATG3Q9NT62 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.16□□□□□ -1.74
ATG3Q9NT62 AP005660.1-201ENST00000522972 293 ntBASIC4.16□□□□□ -1.74
ATG3Q9NT62 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.16□□□□□ -1.74
ATG3Q9NT62 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.16□□□□□ -1.74
ATG3Q9NT62 AC055872.1-201ENST00000570978 278 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms