Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.55□□□□□ -2.16
POLE3Q9NRF9 AC063944.3-201ENST00000609969 533 ntBASIC1.55□□□□□ -2.16
POLE3Q9NRF9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.55□□□□□ -2.16
POLE3Q9NRF9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
POLE3Q9NRF9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
POLE3Q9NRF9 AC100821.1-201ENST00000523153 2479 ntBASIC1.54□□□□□ -2.16
POLE3Q9NRF9 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.54□□□□□ -2.16
POLE3Q9NRF9 ARL5AP1-201ENST00000418991 388 ntBASIC1.54□□□□□ -2.16
POLE3Q9NRF9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.54□□□□□ -2.16
POLE3Q9NRF9 AC099677.2-201ENST00000436385 175 ntBASIC1.54□□□□□ -2.16
POLE3Q9NRF9 JTBP1-201ENST00000441314 247 ntBASIC1.54□□□□□ -2.16
POLE3Q9NRF9 RNU6-1037P-201ENST00000459571 107 ntBASIC1.54□□□□□ -2.16
POLE3Q9NRF9 AC079140.3-201ENST00000511111 550 ntBASIC1.54□□□□□ -2.16
POLE3Q9NRF9 RNU6-612P-201ENST00000516909 102 ntBASIC1.54□□□□□ -2.16
POLE3Q9NRF9 AP003034.1-201ENST00000534621 422 ntBASIC1.54□□□□□ -2.16
POLE3Q9NRF9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.54□□□□□ -2.16
POLE3Q9NRF9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.54□□□□□ -2.16
POLE3Q9NRF9 SNORA77B-201ENST00000578179 125 ntBASIC1.54□□□□□ -2.16
POLE3Q9NRF9 AC073648.5-201ENST00000603502 305 ntBASIC1.54□□□□□ -2.16
POLE3Q9NRF9 AC087752.4-201ENST00000605911 462 ntBASIC1.54□□□□□ -2.16
POLE3Q9NRF9 MIR502-201ENST00000606349 86 ntBASIC1.54□□□□□ -2.16
POLE3Q9NRF9 HULC.1-201ENST00000612720 240 ntBASIC1.54□□□□□ -2.16
POLE3Q9NRF9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.54□□□□□ -2.16
POLE3Q9NRF9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
POLE3Q9NRF9 ICE2P2-201ENST00000483823 2787 ntBASIC1.53□□□□□ -2.16
POLE3Q9NRF9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
POLE3Q9NRF9 RNU6-545P-201ENST00000362681 104 ntBASIC1.53□□□□□ -2.16
POLE3Q9NRF9 RNU1-96P-201ENST00000364163 162 ntBASIC1.53□□□□□ -2.16
POLE3Q9NRF9 RNU6-360P-201ENST00000390944 104 ntBASIC1.53□□□□□ -2.16
POLE3Q9NRF9 MTCO1P21-201ENST00000416634 589 ntBASIC1.53□□□□□ -2.16
POLE3Q9NRF9 FTH1P12-201ENST00000432137 551 ntBASIC1.53□□□□□ -2.16
POLE3Q9NRF9 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.53□□□□□ -2.16
POLE3Q9NRF9 snoU13.6-201ENST00000458785 104 ntBASIC1.53□□□□□ -2.16
POLE3Q9NRF9 RPL26P26-201ENST00000480251 434 ntBASIC1.53□□□□□ -2.16
POLE3Q9NRF9 BET1P1-201ENST00000482276 359 ntBASIC1.53□□□□□ -2.16
POLE3Q9NRF9 AC091435.1-201ENST00000505442 584 ntBASIC1.53□□□□□ -2.16
POLE3Q9NRF9 RNU6-1041P-201ENST00000516254 102 ntBASIC1.53□□□□□ -2.16
POLE3Q9NRF9 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.16
POLE3Q9NRF9 MIR6845-201ENST00000613182 61 ntBASIC1.53□□□□□ -2.16
POLE3Q9NRF9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
POLE3Q9NRF9 RNU6-1019P-201ENST00000364424 107 ntBASIC1.52□□□□□ -2.17
POLE3Q9NRF9 SNORD37.1-201ENST00000390968 65 ntBASIC1.52□□□□□ -2.17
POLE3Q9NRF9 SNORA26.9-201ENST00000391322 122 ntBASIC1.52□□□□□ -2.17
POLE3Q9NRF9 AC092447.3-201ENST00000426027 686 ntBASIC1.52□□□□□ -2.17
POLE3Q9NRF9 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.52□□□□□ -2.17
POLE3Q9NRF9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.52□□□□□ -2.17
POLE3Q9NRF9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.52□□□□□ -2.17
POLE3Q9NRF9 CCDC34P1-201ENST00000507441 517 ntBASIC1.52□□□□□ -2.17
POLE3Q9NRF9 SNORA14.1-201ENST00000516113 141 ntBASIC1.52□□□□□ -2.17
POLE3Q9NRF9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.52□□□□□ -2.17
POLE3Q9NRF9 RNU6-295P-201ENST00000516901 104 ntBASIC1.52□□□□□ -2.17
POLE3Q9NRF9 RNA5SP437-201ENST00000517249 129 ntBASIC1.52□□□□□ -2.17
POLE3Q9NRF9 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.52□□□□□ -2.17
POLE3Q9NRF9 MIR3945-201ENST00000581853 98 ntBASIC1.52□□□□□ -2.17
POLE3Q9NRF9 AC121247.2-201ENST00000604776 136 ntBASIC1.52□□□□□ -2.17
POLE3Q9NRF9 AC007684.1-201ENST00000609671 477 ntBASIC1.52□□□□□ -2.17
POLE3Q9NRF9 AP000648.3-201ENST00000623539 4507 ntBASIC1.52□□□□□ -2.17
POLE3Q9NRF9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
POLE3Q9NRF9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
POLE3Q9NRF9 RNU6-227P-201ENST00000362865 103 ntBASIC1.51□□□□□ -2.17
POLE3Q9NRF9 Y_RNA.381-201ENST00000365666 102 ntBASIC1.51□□□□□ -2.17
POLE3Q9NRF9 RNU6-418P-201ENST00000384035 107 ntBASIC1.51□□□□□ -2.17
POLE3Q9NRF9 C8orf59P1-201ENST00000429930 303 ntBASIC1.51□□□□□ -2.17
POLE3Q9NRF9 AC245047.4-201ENST00000433189 144 ntBASIC1.51□□□□□ -2.17
POLE3Q9NRF9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.51□□□□□ -2.17
POLE3Q9NRF9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.51□□□□□ -2.17
POLE3Q9NRF9 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.51□□□□□ -2.17
POLE3Q9NRF9 MTCO2P18-201ENST00000457151 658 ntBASIC1.51□□□□□ -2.17
POLE3Q9NRF9 RNU6-956P-201ENST00000458868 103 ntBASIC1.51□□□□□ -2.17
POLE3Q9NRF9 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
POLE3Q9NRF9 RNU6-323P-201ENST00000521915 107 ntBASIC1.51□□□□□ -2.17
POLE3Q9NRF9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.51□□□□□ -2.17
POLE3Q9NRF9 AK6P1-201ENST00000540219 478 ntBASIC1.51□□□□□ -2.17
POLE3Q9NRF9 AC084364.2-201ENST00000546924 395 ntBASIC1.51□□□□□ -2.17
POLE3Q9NRF9 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.51□□□□□ -2.17
POLE3Q9NRF9 MIR3683-201ENST00000580847 82 ntBASIC1.51□□□□□ -2.17
POLE3Q9NRF9 MIR3976-201ENST00000606807 139 ntBASIC1.51□□□□□ -2.17
POLE3Q9NRF9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.51□□□□□ -2.17
POLE3Q9NRF9 AL158063.1-201ENST00000615349 536 ntBASIC1.51□□□□□ -2.17
POLE3Q9NRF9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
POLE3Q9NRF9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
POLE3Q9NRF9 RNU6-562P-201ENST00000362731 107 ntBASIC1.5□□□□□ -2.17
POLE3Q9NRF9 Y_RNA.255-201ENST00000364581 97 ntBASIC1.5□□□□□ -2.17
POLE3Q9NRF9 Y_RNA.296-201ENST00000364930 108 ntBASIC1.5□□□□□ -2.17
POLE3Q9NRF9 MIR548B-201ENST00000385247 97 ntBASIC1.5□□□□□ -2.17
POLE3Q9NRF9 RNU6-1158P-201ENST00000391167 107 ntBASIC1.5□□□□□ -2.17
POLE3Q9NRF9 MIR300-201ENST00000401138 83 ntBASIC1.5□□□□□ -2.17
POLE3Q9NRF9 RN7SKP101-201ENST00000411376 320 ntBASIC1.5□□□□□ -2.17
POLE3Q9NRF9 AL358453.1-201ENST00000422522 250 ntBASIC1.5□□□□□ -2.17
POLE3Q9NRF9 MTND3P9-201ENST00000429526 346 ntBASIC1.5□□□□□ -2.17
POLE3Q9NRF9 AC007677.1-201ENST00000445757 515 ntBASIC1.5□□□□□ -2.17
POLE3Q9NRF9 AL513124.1-201ENST00000450410 614 ntBASIC1.5□□□□□ -2.17
POLE3Q9NRF9 snoU13.15-201ENST00000459407 104 ntBASIC1.5□□□□□ -2.17
POLE3Q9NRF9 RPS26P55-201ENST00000471178 356 ntBASIC1.5□□□□□ -2.17
POLE3Q9NRF9 RPS3AP17-201ENST00000472594 777 ntBASIC1.5□□□□□ -2.17
POLE3Q9NRF9 RNA5SP445-201ENST00000515889 115 ntBASIC1.5□□□□□ -2.17
POLE3Q9NRF9 RNA5SP481-201ENST00000516814 122 ntBASIC1.5□□□□□ -2.17
POLE3Q9NRF9 AP000889.1-201ENST00000530968 660 ntBASIC1.5□□□□□ -2.17
POLE3Q9NRF9 AL160236.1-201ENST00000556317 195 ntBASIC1.5□□□□□ -2.17
POLE3Q9NRF9 MIR4753-201ENST00000585119 83 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms