Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 SNORA31.17-201ENST00000516953 127 ntBASIC1.26□□□□□ -2.21
EXOSC4Q9NPD3 SNORA44.1-201ENST00000517031 108 ntBASIC1.26□□□□□ -2.21
EXOSC4Q9NPD3 SNORA31.24-201ENST00000517232 57 ntBASIC1.26□□□□□ -2.21
EXOSC4Q9NPD3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.26□□□□□ -2.21
EXOSC4Q9NPD3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.26□□□□□ -2.21
EXOSC4Q9NPD3 AL118558.2-201ENST00000556294 238 ntBASIC1.26□□□□□ -2.21
EXOSC4Q9NPD3 MIR4424-201ENST00000585257 86 ntBASIC1.26□□□□□ -2.21
EXOSC4Q9NPD3 VN1R80P-201ENST00000597126 338 ntBASIC1.26□□□□□ -2.21
EXOSC4Q9NPD3 VN1R107P-201ENST00000601784 209 ntBASIC1.26□□□□□ -2.21
EXOSC4Q9NPD3 PCGEM1.1-201ENST00000613431 131 ntBASIC1.26□□□□□ -2.21
EXOSC4Q9NPD3 SNORA43.4-201ENST00000629559 138 ntBASIC1.26□□□□□ -2.21
EXOSC4Q9NPD3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.26□□□□□ -2.21
EXOSC4Q9NPD3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 AP000560.1-201ENST00000624150 1937 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 CBX3P1-201ENST00000325243 554 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 MIR340-201ENST00000362125 95 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 RNU6-661P-201ENST00000362409 107 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 Y_RNA.332-201ENST00000365271 113 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 RNU6-160P-201ENST00000384591 107 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 MIR1261-201ENST00000408659 82 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 RNA5SP201-201ENST00000410316 124 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 RNU4-55P-201ENST00000410731 137 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 CYCSP49-201ENST00000420810 319 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 AC010095.1-201ENST00000443543 144 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 FTH1P25-201ENST00000447665 469 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 TPTE2P5-203ENST00000458118 728 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 RNU6-333P-201ENST00000459117 107 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 AC130509.1-201ENST00000464158 433 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 MTCO3P38-201ENST00000468910 766 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 Y_RNA.688-201ENST00000516565 95 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 RNU6-1098P-201ENST00000516772 96 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 RNU6-548P-201ENST00000517083 115 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 RNU6-323P-201ENST00000521915 107 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 AP005136.1-201ENST00000579765 429 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 AC087683.1-201ENST00000591187 441 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 Z98751.3-201ENST00000604447 521 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 AC116312.1-201ENST00000606841 314 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 AC064836.2-201ENST00000609491 462 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 RMST_6.1-201ENST00000611980 203 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 AC139792.3-201ENST00000623525 224 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 AC022513.1-201ENST00000624512 117 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 LINC02555-201ENST00000563933 1951 ntBASIC1.25□□□□□ -2.21
EXOSC4Q9NPD3 RNU4-56P-201ENST00000364700 142 ntBASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 Y_RNA.378-201ENST00000365652 113 ntBASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 SNORD37.1-201ENST00000390968 65 ntBASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 MTCO3P41-201ENST00000414801 328 ntBASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 AL035666.1-201ENST00000446195 348 ntBASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 MTCO2P18-201ENST00000457151 658 ntBASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 SNORD13-201ENST00000459299 104 ntBASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 TOMM22P6-201ENST00000465035 409 ntBASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 AC008628.2-201ENST00000502605 298 ntBASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 AC016632.1-201ENST00000503994 196 ntBASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 SNORA14.1-201ENST00000516113 141 ntBASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 AC104576.1-201ENST00000524225 88 ntBASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 AP003034.1-201ENST00000534621 422 ntBASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 AC021231.3-201ENST00000558497 370 ntBASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 MIR3611-201ENST00000584484 83 ntBASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 AC025811.1-201ENST00000604312 472 ntBASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 AC097520.1-201ENST00000624435 385 ntBASIC1.24□□□□□ -2.21
EXOSC4Q9NPD3 AL161722.3-201ENST00000605789 2983 ntBASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 AC092268.1-201ENST00000342691 405 ntBASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 U3.9-201ENST00000363823 204 ntBASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 RNU6-438P-201ENST00000365561 103 ntBASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 RNY3P9-201ENST00000384727 106 ntBASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 Y_RNA.582-201ENST00000391023 95 ntBASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 SNORA26.3-201ENST00000391119 136 ntBASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 AC139712.2-201ENST00000424302 339 ntBASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 SDAD1P3-201ENST00000427380 333 ntBASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 snoU13.6-201ENST00000458785 104 ntBASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 RNU7-14P-201ENST00000459331 62 ntBASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 RNU7-138P-201ENST00000459479 64 ntBASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 YWHAEP4-201ENST00000505390 198 ntBASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 HMGB1P29-201ENST00000505659 499 ntBASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 AC079140.5-201ENST00000507882 310 ntBASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 AC091133.4-201ENST00000511142 308 ntBASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 RNA5SP401-201ENST00000515920 127 ntBASIC1.23□□□□□ -2.21
EXOSC4Q9NPD3 SNORA40.12-201ENST00000516329 111 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms