Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0□□□□□ -2.41
VPS25Q9BRG1 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0□□□□□ -2.41
VPS25Q9BRG1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0□□□□□ -2.41
VPS25Q9BRG1 RNU6-496P-201ENST00000516145 99 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 RNU6-751P-201ENST00000516382 101 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0□□□□□ -2.41
VPS25Q9BRG1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0□□□□□ -2.41
VPS25Q9BRG1 AC131055.1-201ENST00000584626 316 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 LARP7P1-201ENST00000605576 316 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0□□□□□ -2.41
VPS25Q9BRG1 AL096861.1-201ENST00000610899 123 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 Z69720.2-201ENST00000624755 279 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 AL157786.1-207ENST00000627771 695 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 MIR653-201ENST00000385279 96 ntBASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 MIR140-201ENST00000385282 100 ntBASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 AL034345.1-201ENST00000407768 123 ntBASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 AL162725.1-201ENST00000435405 301 ntBASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 AC244670.1-201ENST00000436879 112 ntBASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 Z73417.1-201ENST00000447373 778 ntBASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 NFU1P2-201ENST00000448700 469 ntBASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 U7.7-201ENST00000459276 60 ntBASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 RPS29P1-201ENST00000465274 159 ntBASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 DEFB131C-201ENST00000528817 165 ntBASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 AC007834.2-201ENST00000536310 343 ntBASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 BCRP9-201ENST00000605312 388 ntBASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 MIR8054-201ENST00000620877 86 ntBASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
VPS25Q9BRG1 MTND4P5-201ENST00000435821 1374 ntBASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 RNU6-105P-201ENST00000363909 104 ntBASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 Y_RNA.578-201ENST00000390903 88 ntBASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 RN7SKP266-201ENST00000410232 287 ntBASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 RPL23AP50-201ENST00000434149 455 ntBASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 AC245047.8-201ENST00000456455 284 ntBASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 AC026616.1-201ENST00000523157 525 ntBASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 SUB1P2-201ENST00000556401 297 ntBASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 AC090517.1-201ENST00000569307 266 ntBASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 MTATP6P2-201ENST00000603319 678 ntBASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 RNU6-94P-201ENST00000607728 107 ntBASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 AC131235.4-201ENST00000609288 620 ntBASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 AC006001.4-201ENST00000622243 395 ntBASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 U6.108-201ENST00000637764 58 ntBASIC-0.02□□□□□ -2.41
VPS25Q9BRG1 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 AC092268.1-201ENST00000342691 405 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 RNU6-236P-201ENST00000363886 106 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 RNU1-93P-201ENST00000364704 169 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 MIR660-201ENST00000385235 97 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 RNA5SP323-201ENST00000391094 133 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 RNU6-293P-201ENST00000411259 106 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 AC006366.1-201ENST00000422002 759 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 RPL31P35-201ENST00000431058 377 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 AL445305.1-201ENST00000432577 575 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 RPS25P9-201ENST00000435591 252 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 RPS20P10-201ENST00000451209 253 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 RPL39P39-201ENST00000455840 151 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 RNU6-123P-201ENST00000516163 102 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 RNA5SP458-201ENST00000516188 119 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 AC109810.1-201ENST00000534066 224 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 AC090049.2-201ENST00000550377 109 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 MIR3923-201ENST00000579521 83 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 MTATP6P3-201ENST00000581686 676 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 AL512605.2-201ENST00000592972 256 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 AC174048.1-201ENST00000603389 144 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 AC100812.1-201ENST00000607622 580 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.03□□□□□ -2.41
VPS25Q9BRG1 RNA5SP62-201ENST00000363457 110 ntBASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 SNORA36A-201ENST00000384221 132 ntBASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 AL451046.2-201ENST00000403074 277 ntBASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 Y_RNA.595-201ENST00000410403 105 ntBASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 AC104332.1-201ENST00000440471 797 ntBASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 RPS23P5-201ENST00000495419 428 ntBASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 FABP5P5-201ENST00000515537 406 ntBASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 AP000889.1-201ENST00000530968 660 ntBASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 EIF4A1P12-201ENST00000551910 141 ntBASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 TMF1P1-201ENST00000576058 373 ntBASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 MIR544B-201ENST00000582372 78 ntBASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 SNRPGP20-201ENST00000604477 205 ntBASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 AC104458.1-201ENST00000608243 463 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms