Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SPRR2C-201ENST00000290702 219 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 RNU6-379P-201ENST00000363813 104 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 U3.9-201ENST00000363823 204 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 Y_RNA.179-201ENST00000363844 90 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 RNU6-1318P-201ENST00000365389 103 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 Y_RNA.350-201ENST00000365409 98 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 RNU6-1027P-201ENST00000383998 107 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 RNU6-245P-201ENST00000384020 107 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 Y_RNA.447-201ENST00000384184 113 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 SNORD63-201ENST00000384262 68 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 RNU1-13P-201ENST00000384499 162 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 AL512633.1-201ENST00000399931 655 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.05□□□□□ -2.08
LITAFQ99732 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.05□□□□□ -2.08
LITAFQ99732 AC096920.1-201ENST00000423991 241 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 ARL5AP4-201ENST00000430731 512 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.05□□□□□ -2.08
LITAFQ99732 AC005002.2-201ENST00000438228 269 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC2.05□□□□□ -2.08
LITAFQ99732 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.05□□□□□ -2.08
LITAFQ99732 AC025518.1-201ENST00000479856 347 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.05□□□□□ -2.08
LITAFQ99732 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.05□□□□□ -2.08
LITAFQ99732 SNORA40.9-201ENST00000515895 93 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 RNA5SP112-201ENST00000515937 99 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 SCARNA11.3-201ENST00000517276 130 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 AC103810.1-201ENST00000579873 453 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.05□□□□□ -2.08
LITAFQ99732 AC008739.2-201ENST00000597006 317 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 MZT1P2-201ENST00000604387 248 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 SNRPGP20-201ENST00000604477 205 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 AC211433.2-201ENST00000608433 387 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 MIR6862-1-201ENST00000613016 70 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 MIR6862-2-201ENST00000614755 70 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LITAFQ99732 AC018692.3-201ENST00000623929 123 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LITAFQ99732 AC069528.2-201ENST00000624849 1991 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.05□□□□□ -2.08
LITAFQ99732 AC026241.1-201ENST00000517873 2142 ntBASIC2.05□□□□□ -2.08
LITAFQ99732 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LITAFQ99732 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LITAFQ99732 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LITAFQ99732 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.04□□□□□ -2.08
LITAFQ99732 AC073325.2-201ENST00000339545 159 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 Y_RNA.14-201ENST00000362415 103 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 RNU4-35P-201ENST00000362588 141 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 SNORD113-8-201ENST00000363497 74 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 RNU6-961P-201ENST00000363893 105 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 RNU6-793P-201ENST00000384233 104 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 Y_RNA.462-201ENST00000384268 102 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 SNORA70C-201ENST00000384538 135 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 SNORA46.1-201ENST00000391069 153 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 MIR320B2-201ENST00000408479 138 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 Y_RNA.595-201ENST00000410403 105 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 MTND5P6-201ENST00000422338 1798 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 RPL18P10-201ENST00000425606 538 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 AL445584.1-201ENST00000431451 330 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.04□□□□□ -2.08
LITAFQ99732 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.04□□□□□ -2.08
LITAFQ99732 RPS29P33-201ENST00000456717 146 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 RPL21P10-201ENST00000463521 490 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 AC091179.3-201ENST00000474761 144 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 MTND1P19-201ENST00000511780 315 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 Y_RNA.680-201ENST00000516441 93 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 Y_RNA.683-201ENST00000516508 93 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 RNU6-794P-201ENST00000517261 64 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.04□□□□□ -2.08
LITAFQ99732 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.04□□□□□ -2.08
LITAFQ99732 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.04□□□□□ -2.08
LITAFQ99732 MTND5P35-201ENST00000557537 1720 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 AL035425.3-201ENST00000564206 4996 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 RN7SL703P-201ENST00000578485 302 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 RPL30P11-203ENST00000598995 310 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 Mico1.1-201ENST00000611698 204 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 AP001282.2-201ENST00000616149 309 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 SDR42E1P4-201ENST00000620894 481 ntBASIC2.04□□□□□ -2.08
LITAFQ99732 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
LITAFQ99732 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.04□□□□□ -2.08
LITAFQ99732 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LITAFQ99732 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.04□□□□□ -2.08
LITAFQ99732 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
LITAFQ99732 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
LITAFQ99732 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.03□□□□□ -2.08
LITAFQ99732 RNU1-62P-201ENST00000362599 164 ntBASIC2.03□□□□□ -2.08
LITAFQ99732 RNU6-486P-201ENST00000363116 107 ntBASIC2.03□□□□□ -2.08
LITAFQ99732 RNU6-626P-201ENST00000363354 107 ntBASIC2.03□□□□□ -2.08
LITAFQ99732 RNU6-20P-201ENST00000384106 107 ntBASIC2.03□□□□□ -2.08
LITAFQ99732 Y_RNA.489-201ENST00000384410 101 ntBASIC2.03□□□□□ -2.08
LITAFQ99732 Y_RNA.562-201ENST00000384695 113 ntBASIC2.03□□□□□ -2.08
LITAFQ99732 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
LITAFQ99732 Y_RNA.581-201ENST00000391017 97 ntBASIC2.03□□□□□ -2.08
LITAFQ99732 Y_RNA.602-201ENST00000410535 92 ntBASIC2.03□□□□□ -2.08
LITAFQ99732 RNU6-1328P-201ENST00000410938 106 ntBASIC2.03□□□□□ -2.08
LITAFQ99732 AC027124.2-201ENST00000428249 105 ntBASIC2.03□□□□□ -2.08
LITAFQ99732 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.03□□□□□ -2.08
LITAFQ99732 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.03□□□□□ -2.08
LITAFQ99732 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.03□□□□□ -2.08
LITAFQ99732 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.03□□□□□ -2.08
LITAFQ99732 AC007395.1-201ENST00000451333 677 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms