Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.49□□□□□ -2.17
RPRD1AQ96P16 AC233981.2-201ENST00000611524 1614 ntBASIC1.48□□□□□ -2.17
RPRD1AQ96P16 ZNF209P-201ENST00000593450 2304 ntBASIC1.48□□□□□ -2.17
RPRD1AQ96P16 RNU6-517P-201ENST00000384362 110 ntBASIC1.48□□□□□ -2.17
RPRD1AQ96P16 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.48□□□□□ -2.17
RPRD1AQ96P16 BTF3P4-201ENST00000418852 495 ntBASIC1.48□□□□□ -2.17
RPRD1AQ96P16 RPS6P15-201ENST00000431996 751 ntBASIC1.48□□□□□ -2.17
RPRD1AQ96P16 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.48□□□□□ -2.17
RPRD1AQ96P16 SNRPGP13-201ENST00000442212 177 ntBASIC1.48□□□□□ -2.17
RPRD1AQ96P16 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RPRD1AQ96P16 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.48□□□□□ -2.17
RPRD1AQ96P16 RNU7-180P-201ENST00000459240 63 ntBASIC1.48□□□□□ -2.17
RPRD1AQ96P16 AC008628.2-201ENST00000502605 298 ntBASIC1.48□□□□□ -2.17
RPRD1AQ96P16 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.48□□□□□ -2.17
RPRD1AQ96P16 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.48□□□□□ -2.17
RPRD1AQ96P16 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.48□□□□□ -2.17
RPRD1AQ96P16 EIF4A1P12-201ENST00000551910 141 ntBASIC1.48□□□□□ -2.17
RPRD1AQ96P16 AL161670.1-201ENST00000554348 137 ntBASIC1.48□□□□□ -2.17
RPRD1AQ96P16 AL160236.1-201ENST00000556317 195 ntBASIC1.48□□□□□ -2.17
RPRD1AQ96P16 MIR4528-201ENST00000577763 90 ntBASIC1.48□□□□□ -2.17
RPRD1AQ96P16 MIR4422-201ENST00000581938 83 ntBASIC1.48□□□□□ -2.17
RPRD1AQ96P16 MIR3941-201ENST00000582572 103 ntBASIC1.48□□□□□ -2.17
RPRD1AQ96P16 U2.17-201ENST00000611454 95 ntBASIC1.48□□□□□ -2.17
RPRD1AQ96P16 MIR8074-201ENST00000615081 81 ntBASIC1.48□□□□□ -2.17
RPRD1AQ96P16 AC068205.3-201ENST00000636385 468 ntBASIC1.48□□□□□ -2.17
RPRD1AQ96P16 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.48□□□□□ -2.17
RPRD1AQ96P16 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.47□□□□□ -2.17
RPRD1AQ96P16 RNU6-438P-201ENST00000365561 103 ntBASIC1.47□□□□□ -2.17
RPRD1AQ96P16 RNU6-296P-201ENST00000384608 107 ntBASIC1.47□□□□□ -2.17
RPRD1AQ96P16 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.47□□□□□ -2.17
RPRD1AQ96P16 RNU6-955P-201ENST00000410497 104 ntBASIC1.47□□□□□ -2.17
RPRD1AQ96P16 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.47□□□□□ -2.17
RPRD1AQ96P16 AC092447.3-201ENST00000426027 686 ntBASIC1.47□□□□□ -2.17
RPRD1AQ96P16 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.47□□□□□ -2.17
RPRD1AQ96P16 USP9YP29-201ENST00000445112 563 ntBASIC1.47□□□□□ -2.17
RPRD1AQ96P16 RNU7-95P-201ENST00000459222 64 ntBASIC1.47□□□□□ -2.17
RPRD1AQ96P16 RNU7-14P-201ENST00000459331 62 ntBASIC1.47□□□□□ -2.17
RPRD1AQ96P16 AC087477.1-201ENST00000465747 340 ntBASIC1.47□□□□□ -2.17
RPRD1AQ96P16 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.47□□□□□ -2.17
RPRD1AQ96P16 CCDC34P1-201ENST00000507441 517 ntBASIC1.47□□□□□ -2.17
RPRD1AQ96P16 AC090115.3-201ENST00000553218 849 ntBASIC1.47□□□□□ -2.17
RPRD1AQ96P16 DNAJC19P9-201ENST00000555084 351 ntBASIC1.47□□□□□ -2.17
RPRD1AQ96P16 CYP4A27P-201ENST00000567218 190 ntBASIC1.47□□□□□ -2.17
RPRD1AQ96P16 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.47□□□□□ -2.17
RPRD1AQ96P16 AC073114.1-201ENST00000612027 490 ntBASIC1.47□□□□□ -2.17
RPRD1AQ96P16 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.47□□□□□ -2.17
RPRD1AQ96P16 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.47□□□□□ -2.17
RPRD1AQ96P16 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
RPRD1AQ96P16 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
RPRD1AQ96P16 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.46□□□□□ -2.18
RPRD1AQ96P16 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
RPRD1AQ96P16 SNORD31B-201ENST00000364977 69 ntBASIC1.46□□□□□ -2.18
RPRD1AQ96P16 AP000275.1-201ENST00000411943 390 ntBASIC1.46□□□□□ -2.18
RPRD1AQ96P16 AC007098.1-201ENST00000420122 367 ntBASIC1.46□□□□□ -2.18
RPRD1AQ96P16 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
RPRD1AQ96P16 VN1R108P-201ENST00000431580 830 ntBASIC1.46□□□□□ -2.18
RPRD1AQ96P16 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.46□□□□□ -2.18
RPRD1AQ96P16 AC073415.1-201ENST00000449240 153 ntBASIC1.46□□□□□ -2.18
RPRD1AQ96P16 AC016925.1-201ENST00000458303 298 ntBASIC1.46□□□□□ -2.18
RPRD1AQ96P16 RPS29P23-201ENST00000458635 123 ntBASIC1.46□□□□□ -2.18
RPRD1AQ96P16 RNU7-63P-201ENST00000459054 62 ntBASIC1.46□□□□□ -2.18
RPRD1AQ96P16 AC025465.3-201ENST00000510570 311 ntBASIC1.46□□□□□ -2.18
RPRD1AQ96P16 RPL39P5-202ENST00000512505 151 ntBASIC1.46□□□□□ -2.18
RPRD1AQ96P16 RNU5F-4P-201ENST00000516581 114 ntBASIC1.46□□□□□ -2.18
RPRD1AQ96P16 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.46□□□□□ -2.18
RPRD1AQ96P16 AC021231.3-201ENST00000558497 370 ntBASIC1.46□□□□□ -2.18
RPRD1AQ96P16 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.46□□□□□ -2.18
RPRD1AQ96P16 AC009994.1-201ENST00000606889 253 ntBASIC1.46□□□□□ -2.18
RPRD1AQ96P16 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
RPRD1AQ96P16 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
RPRD1AQ96P16 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
RPRD1AQ96P16 AC245060.5-201ENST00000610778 3293 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 U8.1-201ENST00000362843 134 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 RNU1-76P-201ENST00000362903 159 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 SNORD73A-201ENST00000386062 65 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
RPRD1AQ96P16 MIR208B-201ENST00000401172 77 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 AL049545.1-201ENST00000401856 572 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 AP1B1P2-201ENST00000416196 106 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.45□□□□□ -2.18
RPRD1AQ96P16 RPL21P111-201ENST00000418453 477 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.45□□□□□ -2.18
RPRD1AQ96P16 AC002486.1-201ENST00000435098 391 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 AC099677.2-201ENST00000436385 175 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 MTCO1P44-201ENST00000441935 243 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 AC009474.2-201ENST00000451383 136 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 RPL31P3-201ENST00000458430 332 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 AC010531.2-201ENST00000465012 153 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.45□□□□□ -2.18
RPRD1AQ96P16 ARL2BPP4-201ENST00000506854 471 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 SUMO2P18-201ENST00000518873 252 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.45□□□□□ -2.18
RPRD1AQ96P16 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.45□□□□□ -2.18
RPRD1AQ96P16 AL391646.1-201ENST00000603860 190 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 AC005520.5-201ENST00000613926 164 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 AC005609.4-201ENST00000625071 447 ntBASIC1.45□□□□□ -2.18
RPRD1AQ96P16 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.45□□□□□ -2.18
RPRD1AQ96P16 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
RPRD1AQ96P16 RNU6-996P-201ENST00000365438 107 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms