Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MIR4795-201ENST00000584182 89 ntBASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 MIR5002-201ENST00000584713 97 ntBASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 AC022202.1-201ENST00000613515 211 ntBASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 SDR42E1P4-201ENST00000620894 481 ntBASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 AL359757.2-201ENST00000624309 274 ntBASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 Y_RNA.40-201ENST00000362645 93 ntBASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 RNU4-79P-201ENST00000362764 141 ntBASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 RNU6-105P-201ENST00000363909 104 ntBASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 SNORA16B-201ENST00000364674 135 ntBASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 AL512604.1-201ENST00000404812 257 ntBASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 RPL37P10-201ENST00000412884 288 ntBASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 MTND3P23-201ENST00000431980 347 ntBASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 AC007969.2-201ENST00000441891 191 ntBASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 AC107399.1-201ENST00000451226 265 ntBASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 RPL39P5-202ENST00000512505 151 ntBASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 AC233702.2-202ENST00000562547 291 ntBASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 AC009314.1-201ENST00000603871 304 ntBASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 AL159153.1-201ENST00000619688 317 ntBASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 AP000553.5-201ENST00000641933 54 ntBASIC2.15□□□□□ -2.07
PDLIM5Q96HC4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 MTND4P23-201ENST00000447723 1363 ntBASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 snoU2_19.1-201ENST00000362361 80 ntBASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 RNU6-325P-201ENST00000411132 105 ntBASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 HMGB3P2-201ENST00000411913 584 ntBASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 AL139396.1-201ENST00000421137 167 ntBASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 CBX3P6-201ENST00000430257 527 ntBASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 AC243964.1-201ENST00000441814 261 ntBASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 FTH1P25-201ENST00000447665 469 ntBASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 RPL9P9-202ENST00000466501 579 ntBASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 AK3P2-201ENST00000507976 429 ntBASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 PTP4A1P4-201ENST00000512479 322 ntBASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 VN1R107P-201ENST00000601784 209 ntBASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 AL133215.3-201ENST00000609801 448 ntBASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 MIR6128-201ENST00000615528 109 ntBASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 MIR6132-201ENST00000622083 109 ntBASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 MIR1302-1-201ENST00000637932 143 ntBASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
PDLIM5Q96HC4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 MTND5P6-201ENST00000422338 1798 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 Y_RNA.58-201ENST00000362807 102 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 Y_RNA.154-201ENST00000363624 102 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 RNU6-1317P-201ENST00000364582 104 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 RNY3P1-201ENST00000365085 102 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 RNY3-201ENST00000365484 102 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 Y_RNA.387-201ENST00000383918 102 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 Y_RNA.482-201ENST00000384377 111 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 Y_RNA.490-201ENST00000384413 102 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 SNORA51.11-201ENST00000384442 131 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 MIR518A2-201ENST00000384966 87 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 U3.40-201ENST00000408706 208 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 RNU4-53P-201ENST00000410828 140 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 SNORD5.1-201ENST00000458800 75 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 RNA5SP233-201ENST00000459153 113 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 RPS29P27-201ENST00000463711 170 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 AC116337.1-201ENST00000509680 687 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 AC026782.1-201ENST00000512952 449 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 AC018630.3-201ENST00000542637 96 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 AL359314.1-201ENST00000616913 261 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 AC098657.3-201ENST00000620434 263 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 AC097372.5-201ENST00000623665 376 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 AC233981.2-201ENST00000611524 1614 ntBASIC2.13□□□□□ -2.07
PDLIM5Q96HC4 Y_RNA.67-201ENST00000362870 100 ntBASIC2.12□□□□□ -2.07
PDLIM5Q96HC4 SNORD116-29-201ENST00000384516 83 ntBASIC2.12□□□□□ -2.07
PDLIM5Q96HC4 RNU6-306P-201ENST00000384617 107 ntBASIC2.12□□□□□ -2.07
PDLIM5Q96HC4 RNU6-293P-201ENST00000411259 106 ntBASIC2.12□□□□□ -2.07
PDLIM5Q96HC4 USP9YP30-201ENST00000430729 455 ntBASIC2.12□□□□□ -2.07
PDLIM5Q96HC4 Y_RNA.632-201ENST00000459189 102 ntBASIC2.12□□□□□ -2.07
PDLIM5Q96HC4 AC022447.4-201ENST00000504053 364 ntBASIC2.12□□□□□ -2.07
PDLIM5Q96HC4 MIR514B-201ENST00000516774 80 ntBASIC2.12□□□□□ -2.07
PDLIM5Q96HC4 APOOP3-201ENST00000536787 586 ntBASIC2.12□□□□□ -2.07
PDLIM5Q96HC4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.12□□□□□ -2.07
PDLIM5Q96HC4 FRG2DP-202ENST00000566967 323 ntBASIC2.12□□□□□ -2.07
PDLIM5Q96HC4 AC005034.5-201ENST00000604219 466 ntBASIC2.12□□□□□ -2.07
PDLIM5Q96HC4 AC019193.3-201ENST00000609144 554 ntBASIC2.12□□□□□ -2.07
PDLIM5Q96HC4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
PDLIM5Q96HC4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PDLIM5Q96HC4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.12□□□□□ -2.07
PDLIM5Q96HC4 ZNF702P-202ENST00000434269 1966 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms