Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC084782.3-201ENST00000612282 578 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 AL136221.1-201ENST00000621449 509 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 MIR6132-201ENST00000622083 109 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 Y_RNA.140-201ENST00000363474 103 ntBASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 RNU6-1317P-201ENST00000364582 104 ntBASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 RNU6-234P-201ENST00000365229 104 ntBASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 U8.8-201ENST00000365399 135 ntBASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 RNU6-438P-201ENST00000365561 103 ntBASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 SNORA26.9-201ENST00000391322 122 ntBASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 U3.40-201ENST00000408706 208 ntBASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 Y_RNA.615-201ENST00000410769 117 ntBASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 AC007677.1-201ENST00000445757 515 ntBASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 RNU7-66P-201ENST00000459469 62 ntBASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 RPS27P21-201ENST00000486977 252 ntBASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 RNA5SP200-201ENST00000516360 103 ntBASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 SCARNA16.3-201ENST00000516595 184 ntBASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 AC243960.4-201ENST00000600532 288 ntBASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 AL359314.1-201ENST00000616913 261 ntBASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.97□□□□□ -2.09
SNRNP40Q96DI7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 AC027514.1-201ENST00000588561 1603 ntBASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 Y_RNA.338-201ENST00000365320 114 ntBASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 SNORA36A-201ENST00000384221 132 ntBASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 MIR1277-201ENST00000408536 78 ntBASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 RNA5SP118-201ENST00000410385 109 ntBASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 Y_RNA.599-201ENST00000410489 109 ntBASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 RNU6-373P-201ENST00000411247 98 ntBASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 AC012306.1-201ENST00000423267 114 ntBASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 UBE2V1P4-201ENST00000425374 344 ntBASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 RPL23AP6-201ENST00000446637 472 ntBASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 FGF7P6-202ENST00000451282 293 ntBASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 AMD1P1-201ENST00000457220 922 ntBASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 RNU5F-4P-201ENST00000516581 114 ntBASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 AC026371.1-201ENST00000551867 419 ntBASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 EIF4A1P12-201ENST00000551910 141 ntBASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 AC011494.1-201ENST00000596454 237 ntBASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 PCGEM1.1-201ENST00000613431 131 ntBASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
SNRNP40Q96DI7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 RNU1-58P-201ENST00000362413 163 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 RNU6-23P-201ENST00000363283 107 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 Y_RNA.295-201ENST00000364918 102 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 RNU6-877P-201ENST00000383868 107 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 Y_RNA.453-201ENST00000384223 109 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 RNU6-160P-201ENST00000384591 107 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 MIR521-1-201ENST00000384902 87 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 Y_RNA.619-201ENST00000410951 90 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 RNA5SP247-201ENST00000411181 105 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 AC096920.1-201ENST00000423991 241 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 AL445646.1-201ENST00000431784 216 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 HMGN2P18-201ENST00000450680 270 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 RNA5SP57-201ENST00000459463 123 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 MTCO1P29-201ENST00000496868 288 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 AC021146.2-201ENST00000504736 556 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 FAM206BP-201ENST00000510179 541 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 AC092436.3-201ENST00000511788 257 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 RNU6-718P-201ENST00000516166 105 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 AC100830.2-201ENST00000581636 240 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 AC146944.4-201ENST00000602697 718 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 AL078605.1-201ENST00000603529 500 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 AC005034.5-201ENST00000604219 466 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 AC016727.1-205ENST00000605437 569 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 AC009831.4-201ENST00000620744 325 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.95□□□□□ -2.1
SNRNP40Q96DI7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 Y_RNA.100-201ENST00000363141 102 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 Y_RNA.123-201ENST00000363338 102 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 RNU6-378P-201ENST00000384324 107 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 RNU6-1026P-201ENST00000384465 108 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 Y_RNA.530-201ENST00000384587 101 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 RNU6-332P-201ENST00000391193 108 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 RNU6-1093P-201ENST00000391194 107 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 RNA5SP201-201ENST00000410316 124 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 NDUFA5P4-201ENST00000436704 385 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms