Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 AC091564.4-201ENST00000533934 2194 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 snoU2_19.1-201ENST00000362361 80 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 Y_RNA.44-201ENST00000362676 108 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 RNU6-486P-201ENST00000363116 107 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 RNA5SP197-201ENST00000363357 119 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 RNU6-727P-201ENST00000363592 107 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 RNU6-1027P-201ENST00000383998 107 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 MIR29B2-201ENST00000385055 81 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 RNU6ATAC-201ENST00000408749 126 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 EIF4EP4-201ENST00000424916 578 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 RAB28P5-201ENST00000427490 651 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 POLR2KP2-201ENST00000438155 177 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 AC004386.2-201ENST00000441858 148 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 RNU6-344P-201ENST00000516635 111 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 AC008011.1-201ENST00000545989 227 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 MIR5006-201ENST00000583027 110 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 AC022441.3-201ENST00000605737 136 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 SNORD11B-201ENST00000607707 90 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 AC107294.3-201ENST00000609211 526 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 IGHVIII-44-202ENST00000636235 289 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 RNU1-75P-201ENST00000347264 129 ntBASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 RNY1-201ENST00000364228 113 ntBASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 MIR554-201ENST00000384874 96 ntBASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 RN7SKP202-201ENST00000410439 330 ntBASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 RNU2-64P-201ENST00000411315 191 ntBASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 AL357552.1-201ENST00000445254 415 ntBASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 AC010401.1-201ENST00000463867 348 ntBASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 AC026402.1-201ENST00000513642 170 ntBASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 RNU6-138P-201ENST00000515952 107 ntBASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 AC106785.1-201ENST00000565935 262 ntBASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 AC011471.1-201ENST00000585766 187 ntBASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 RPL30P11-203ENST00000598995 310 ntBASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 AL590240.4-201ENST00000616908 390 ntBASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 AC022149.2-201ENST00000621061 203 ntBASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.12□□□□□ -1.91
FOXRED1Q96CU9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 AC110774.1-201ENST00000623567 2018 ntBASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 MIR410-201ENST00000362222 80 ntBASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 RN7SKP156-201ENST00000410308 342 ntBASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 ELOCP21-201ENST00000412558 336 ntBASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 AC009237.7-201ENST00000447357 229 ntBASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 RPL23AP67-201ENST00000465341 474 ntBASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 AC092185.1-201ENST00000491371 97 ntBASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 MRPS36P2-201ENST00000512569 299 ntBASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 RNU6-107P-201ENST00000516643 102 ntBASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 SNORA70.19-201ENST00000516717 90 ntBASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 SCARNA14-201ENST00000516903 136 ntBASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 RNU6-182P-201ENST00000516970 105 ntBASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 SCARNA11.3-201ENST00000517276 130 ntBASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 AC087499.8-201ENST00000578406 226 ntBASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 AP003355.3-201ENST00000623465 114 ntBASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 MIR3674-201ENST00000636576 68 ntBASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 MAPK10-322ENST00000641485 4530 ntBASIC3.11□□□□□ -1.91
FOXRED1Q96CU9 MFSD8-233ENST00000641482 4860 ntBASIC3.1□□□□□ -1.91
FOXRED1Q96CU9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
FOXRED1Q96CU9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
FOXRED1Q96CU9 CD24P4-201ENST00000382840 243 ntBASIC3.1□□□□□ -1.91
FOXRED1Q96CU9 Y_RNA.383-201ENST00000383855 97 ntBASIC3.1□□□□□ -1.91
FOXRED1Q96CU9 SNORA18.2-201ENST00000383865 132 ntBASIC3.1□□□□□ -1.91
FOXRED1Q96CU9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.1□□□□□ -1.91
FOXRED1Q96CU9 MTND5P15-201ENST00000434246 349 ntBASIC3.1□□□□□ -1.91
FOXRED1Q96CU9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.1□□□□□ -1.91
FOXRED1Q96CU9 NDUFB4P10-201ENST00000452541 359 ntBASIC3.1□□□□□ -1.91
FOXRED1Q96CU9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.1□□□□□ -1.91
FOXRED1Q96CU9 RN7SL594P-201ENST00000470590 287 ntBASIC3.1□□□□□ -1.91
FOXRED1Q96CU9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms