Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 RNU7-180P-201ENST00000459240 63 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.23□□□□□ -2.21
CPNE4Q96A23 AC005741.1-201ENST00000511094 432 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CPNE4Q96A23 Y_RNA.695-201ENST00000516715 107 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.23□□□□□ -2.21
CPNE4Q96A23 HSPE1P4-201ENST00000550617 308 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 AC090115.3-201ENST00000553218 849 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 HIF1AP1-201ENST00000553642 175 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.23□□□□□ -2.21
CPNE4Q96A23 AP001836.1-201ENST00000604675 523 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 AC008536.2-201ENST00000607284 349 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 AC073114.1-201ENST00000612027 490 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 AL590240.4-201ENST00000616908 390 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 AC008147.4-201ENST00000617570 1204 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.23□□□□□ -2.21
CPNE4Q96A23 AL450472.1-202ENST00000637286 180 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CPNE4Q96A23 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.23□□□□□ -2.21
CPNE4Q96A23 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
CPNE4Q96A23 LINC02555-201ENST00000563933 1951 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.22□□□□□ -2.21
CPNE4Q96A23 RNU6-203P-201ENST00000384038 104 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 RNU5A-6P-201ENST00000384136 116 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.22□□□□□ -2.21
CPNE4Q96A23 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.22□□□□□ -2.21
CPNE4Q96A23 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.22□□□□□ -2.21
CPNE4Q96A23 HMGN2P18-201ENST00000450680 270 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 AC007547.1-201ENST00000462177 490 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 AC099513.1-201ENST00000490423 301 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 AC016632.1-201ENST00000503994 196 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 AK3P2-201ENST00000507976 429 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 AC025465.3-201ENST00000510570 311 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 MIR449C-201ENST00000516047 92 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 RNVU1-2-201ENST00000516326 135 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.22□□□□□ -2.21
CPNE4Q96A23 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.22□□□□□ -2.21
CPNE4Q96A23 RRN3P3-201ENST00000549207 578 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.22□□□□□ -2.21
CPNE4Q96A23 AC103996.1-201ENST00000555468 102 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 MIR5583-1-201ENST00000580941 59 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 AC005786.1-201ENST00000588553 154 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 U2.17-201ENST00000611454 95 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 AC130454.1-201ENST00000622948 401 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 AC022513.1-201ENST00000624512 117 ntBASIC1.22□□□□□ -2.21
CPNE4Q96A23 MTND4P14-201ENST00000435799 1354 ntBASIC1.21□□□□□ -2.21
CPNE4Q96A23 MIR340-201ENST00000362125 95 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 SNORA7.1-201ENST00000363750 139 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 SNORD114-6-201ENST00000364393 72 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 SNORD116-8-201ENST00000384365 95 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 AP000275.1-201ENST00000411943 390 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.21□□□□□ -2.22
CPNE4Q96A23 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.21□□□□□ -2.22
CPNE4Q96A23 AC123900.1-201ENST00000420390 96 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 MTCO2P19-201ENST00000427513 598 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 VN1R108P-201ENST00000431580 830 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 AL603825.1-201ENST00000438481 80 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 AC073415.1-201ENST00000449240 153 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.21□□□□□ -2.22
CPNE4Q96A23 RNU7-63P-201ENST00000459054 62 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 SNRPGP7-201ENST00000469016 106 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 BET1P1-201ENST00000482276 359 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.21□□□□□ -2.22
CPNE4Q96A23 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 AC007834.2-201ENST00000536310 343 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 MIR3923-201ENST00000579521 83 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 AC008088.1-201ENST00000580993 280 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 AC078795.3-201ENST00000602913 472 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 AL391646.1-201ENST00000603860 190 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 snoU13.31-201ENST00000607291 104 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 PCGEM1.1-201ENST00000613431 131 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 AC005520.5-201ENST00000613926 164 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 SNORA43.4-201ENST00000629559 138 ntBASIC1.21□□□□□ -2.22
CPNE4Q96A23 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CPNE4Q96A23 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CPNE4Q96A23 AC233981.2-201ENST00000611524 1614 ntBASIC1.2□□□□□ -2.22
CPNE4Q96A23 U3.9-201ENST00000363823 204 ntBASIC1.2□□□□□ -2.22
CPNE4Q96A23 RNU6-996P-201ENST00000365438 107 ntBASIC1.2□□□□□ -2.22
CPNE4Q96A23 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
CPNE4Q96A23 FGF7P8-201ENST00000402994 292 ntBASIC1.2□□□□□ -2.22
CPNE4Q96A23 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.2□□□□□ -2.22
CPNE4Q96A23 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.2□□□□□ -2.22
CPNE4Q96A23 AC002486.1-201ENST00000435098 391 ntBASIC1.2□□□□□ -2.22
CPNE4Q96A23 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.2□□□□□ -2.22
CPNE4Q96A23 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.2□□□□□ -2.22
CPNE4Q96A23 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.2□□□□□ -2.22
CPNE4Q96A23 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.2□□□□□ -2.22
CPNE4Q96A23 RNU1-123P-201ENST00000458950 160 ntBASIC1.2□□□□□ -2.22
CPNE4Q96A23 AL163540.1-201ENST00000485382 386 ntBASIC1.2□□□□□ -2.22
CPNE4Q96A23 HMGB1P29-201ENST00000505659 499 ntBASIC1.2□□□□□ -2.22
CPNE4Q96A23 RNU6-567P-201ENST00000516746 107 ntBASIC1.2□□□□□ -2.22
CPNE4Q96A23 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.2□□□□□ -2.22
CPNE4Q96A23 AP003034.1-201ENST00000534621 422 ntBASIC1.2□□□□□ -2.22
CPNE4Q96A23 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.2□□□□□ -2.22
CPNE4Q96A23 AC021231.3-201ENST00000558497 370 ntBASIC1.2□□□□□ -2.22
CPNE4Q96A23 SUB1P4-201ENST00000566062 339 ntBASIC1.2□□□□□ -2.22
CPNE4Q96A23 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.2□□□□□ -2.22
CPNE4Q96A23 MIR4424-201ENST00000585257 86 ntBASIC1.2□□□□□ -2.22
CPNE4Q96A23 Z98751.3-201ENST00000604447 521 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms