Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 SNORD32B-201ENST00000364460 84 ntBASIC4.5□□□□□ -1.69
HLA-CQ95604 MIRLET7F2-201ENST00000385277 83 ntBASIC4.5□□□□□ -1.69
HLA-CQ95604 Z92545.1-201ENST00000411782 234 ntBASIC4.5□□□□□ -1.69
HLA-CQ95604 MLLT10P1-201ENST00000418346 262 ntBASIC4.5□□□□□ -1.69
HLA-CQ95604 RPS26P45-201ENST00000471748 340 ntBASIC4.5□□□□□ -1.69
HLA-CQ95604 AC026403.1-201ENST00000518938 295 ntBASIC4.5□□□□□ -1.69
HLA-CQ95604 AC079598.5-201ENST00000547460 117 ntBASIC4.5□□□□□ -1.69
HLA-CQ95604 uc_338.14-201ENST00000613162 166 ntBASIC4.5□□□□□ -1.69
HLA-CQ95604 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.5□□□□□ -1.69
HLA-CQ95604 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-CQ95604 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-CQ95604 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-CQ95604 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HLA-CQ95604 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HLA-CQ95604 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-CQ95604 RNA5SP22-201ENST00000365393 109 ntBASIC4.49□□□□□ -1.69
HLA-CQ95604 Y_RNA.630-201ENST00000411370 108 ntBASIC4.49□□□□□ -1.69
HLA-CQ95604 COX5BP7-201ENST00000414780 274 ntBASIC4.49□□□□□ -1.69
HLA-CQ95604 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-CQ95604 AL031737.1-201ENST00000450125 223 ntBASIC4.49□□□□□ -1.69
HLA-CQ95604 AC090515.1-201ENST00000465295 476 ntBASIC4.49□□□□□ -1.69
HLA-CQ95604 PPIAP15-201ENST00000479662 484 ntBASIC4.49□□□□□ -1.69
HLA-CQ95604 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.49□□□□□ -1.69
HLA-CQ95604 RNA5SP73-201ENST00000516744 108 ntBASIC4.49□□□□□ -1.69
HLA-CQ95604 MIR2681-201ENST00000581814 105 ntBASIC4.49□□□□□ -1.69
HLA-CQ95604 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-CQ95604 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-CQ95604 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
HLA-CQ95604 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-CQ95604 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
HLA-CQ95604 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-CQ95604 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-CQ95604 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-CQ95604 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-CQ95604 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
HLA-CQ95604 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-CQ95604 RNA5SP72-201ENST00000364442 117 ntBASIC4.48□□□□□ -1.69
HLA-CQ95604 Y_RNA.495-201ENST00000384435 112 ntBASIC4.48□□□□□ -1.69
HLA-CQ95604 MIR29B2-201ENST00000385055 81 ntBASIC4.48□□□□□ -1.69
HLA-CQ95604 SNORA57.3-201ENST00000411095 141 ntBASIC4.48□□□□□ -1.69
HLA-CQ95604 AC126124.2-201ENST00000413542 321 ntBASIC4.48□□□□□ -1.69
HLA-CQ95604 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-CQ95604 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-CQ95604 AC023449.1-201ENST00000454464 154 ntBASIC4.48□□□□□ -1.69
HLA-CQ95604 AC083906.5-201ENST00000503722 328 ntBASIC4.48□□□□□ -1.69
HLA-CQ95604 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-CQ95604 Y_RNA.690-201ENST00000516603 95 ntBASIC4.48□□□□□ -1.69
HLA-CQ95604 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-CQ95604 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-CQ95604 snoZ196.1-201ENST00000625269 89 ntBASIC4.48□□□□□ -1.69
HLA-CQ95604 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-CQ95604 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-CQ95604 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-CQ95604 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-CQ95604 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-CQ95604 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HLA-CQ95604 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-CQ95604 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-CQ95604 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-CQ95604 AC008555.8-201ENST00000623602 2168 ntBASIC4.47□□□□□ -1.69
HLA-CQ95604 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-CQ95604 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HLA-CQ95604 AL139095.1-201ENST00000404326 391 ntBASIC4.47□□□□□ -1.69
HLA-CQ95604 MIR1283-1-201ENST00000408494 87 ntBASIC4.47□□□□□ -1.69
HLA-CQ95604 Z82209.1-201ENST00000422141 2135 ntBASIC4.47□□□□□ -1.69
HLA-CQ95604 RPL35AP21-201ENST00000437667 333 ntBASIC4.47□□□□□ -1.69
HLA-CQ95604 RNU6-221P-201ENST00000459541 99 ntBASIC4.47□□□□□ -1.69
HLA-CQ95604 RPL30P14-201ENST00000482744 348 ntBASIC4.47□□□□□ -1.69
HLA-CQ95604 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-CQ95604 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-CQ95604 RN7SKP19-201ENST00000516016 252 ntBASIC4.47□□□□□ -1.69
HLA-CQ95604 RNU5F-4P-201ENST00000516581 114 ntBASIC4.47□□□□□ -1.69
HLA-CQ95604 MIR5582-201ENST00000579697 68 ntBASIC4.47□□□□□ -1.69
HLA-CQ95604 AC008739.2-201ENST00000597006 317 ntBASIC4.47□□□□□ -1.69
HLA-CQ95604 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-CQ95604 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-CQ95604 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-CQ95604 MAPK10-286ENST00000641208 8747 ntBASIC4.47□□□□□ -1.69
HLA-CQ95604 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HLA-CQ95604 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-CQ95604 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-CQ95604 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-CQ95604 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-CQ95604 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
HLA-CQ95604 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-CQ95604 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-CQ95604 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-CQ95604 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
HLA-CQ95604 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-CQ95604 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-CQ95604 DYNLT3P1-201ENST00000378574 347 ntBASIC4.46□□□□□ -1.7
HLA-CQ95604 RNU2-49P-201ENST00000410666 184 ntBASIC4.46□□□□□ -1.7
HLA-CQ95604 CYCSP49-201ENST00000420810 319 ntBASIC4.46□□□□□ -1.7
HLA-CQ95604 RBMY2UP-201ENST00000453474 324 ntBASIC4.46□□□□□ -1.7
HLA-CQ95604 RNU7-57P-201ENST00000459540 60 ntBASIC4.46□□□□□ -1.7
HLA-CQ95604 RPL35AP15-201ENST00000468042 339 ntBASIC4.46□□□□□ -1.7
HLA-CQ95604 SNORD77.4-201ENST00000516158 81 ntBASIC4.46□□□□□ -1.7
HLA-CQ95604 RNU2-60P-201ENST00000517290 128 ntBASIC4.46□□□□□ -1.7
HLA-CQ95604 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-CQ95604 RMST_8.1-201ENST00000610287 165 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms