Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM41Q8WV44 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM41Q8WV44 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM41Q8WV44 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM41Q8WV44 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM41Q8WV44 MIR448-201ENST00000362131 111 ntBASIC6.37□□□□□ -1.39
TRIM41Q8WV44 RNU6-834P-201ENST00000362367 110 ntBASIC6.37□□□□□ -1.39
TRIM41Q8WV44 Y_RNA.172-201ENST00000363765 102 ntBASIC6.37□□□□□ -1.39
TRIM41Q8WV44 RNU1-73P-201ENST00000383971 164 ntBASIC6.37□□□□□ -1.39
TRIM41Q8WV44 SNORA8.3-201ENST00000384679 139 ntBASIC6.37□□□□□ -1.39
TRIM41Q8WV44 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TRIM41Q8WV44 U3.40-201ENST00000408706 208 ntBASIC6.37□□□□□ -1.39
TRIM41Q8WV44 AC096649.2-201ENST00000416186 393 ntBASIC6.37□□□□□ -1.39
TRIM41Q8WV44 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM41Q8WV44 TRBV12-1-201ENST00000479785 344 ntBASIC6.37□□□□□ -1.39
TRIM41Q8WV44 AC109810.1-201ENST00000534066 224 ntBASIC6.37□□□□□ -1.39
TRIM41Q8WV44 FTX_3.1-201ENST00000610451 147 ntBASIC6.37□□□□□ -1.39
TRIM41Q8WV44 AL356489.2-201ENST00000566968 3528 ntBASIC6.37□□□□□ -1.39
TRIM41Q8WV44 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TRIM41Q8WV44 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
TRIM41Q8WV44 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
TRIM41Q8WV44 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM41Q8WV44 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC6.36□□□□□ -1.39
TRIM41Q8WV44 Y_RNA.43-201ENST00000362670 111 ntBASIC6.36□□□□□ -1.39
TRIM41Q8WV44 SNORD74.4-201ENST00000364129 80 ntBASIC6.36□□□□□ -1.39
TRIM41Q8WV44 RPL26P27-201ENST00000414397 437 ntBASIC6.36□□□□□ -1.39
TRIM41Q8WV44 AC019205.3-201ENST00000424573 156 ntBASIC6.36□□□□□ -1.39
TRIM41Q8WV44 RPL39P29-201ENST00000447779 157 ntBASIC6.36□□□□□ -1.39
TRIM41Q8WV44 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM41Q8WV44 RNU6-436P-201ENST00000516171 114 ntBASIC6.36□□□□□ -1.39
TRIM41Q8WV44 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM41Q8WV44 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM41Q8WV44 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM41Q8WV44 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
TRIM41Q8WV44 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM41Q8WV44 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM41Q8WV44 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM41Q8WV44 AF127577.6-201ENST00000623352 2191 ntBASIC6.35□□□□□ -1.39
TRIM41Q8WV44 RNU6-1298P-201ENST00000362456 101 ntBASIC6.35□□□□□ -1.39
TRIM41Q8WV44 Y_RNA.24-201ENST00000362508 103 ntBASIC6.35□□□□□ -1.39
TRIM41Q8WV44 RNU6-1280P-201ENST00000365211 107 ntBASIC6.35□□□□□ -1.39
TRIM41Q8WV44 Y_RNA.466-201ENST00000384294 113 ntBASIC6.35□□□□□ -1.39
TRIM41Q8WV44 Y_RNA.572-201ENST00000384757 98 ntBASIC6.35□□□□□ -1.39
TRIM41Q8WV44 MIR504-201ENST00000385065 83 ntBASIC6.35□□□□□ -1.39
TRIM41Q8WV44 AC092047.1-201ENST00000424997 240 ntBASIC6.35□□□□□ -1.39
TRIM41Q8WV44 PTGES3P4-201ENST00000426243 356 ntBASIC6.35□□□□□ -1.39
TRIM41Q8WV44 APOA2-205ENST00000468465 421 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM41Q8WV44 CYCTP-201ENST00000504253 315 ntBASIC6.35□□□□□ -1.39
TRIM41Q8WV44 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM41Q8WV44 SNORA31.23-201ENST00000517219 133 ntBASIC6.35□□□□□ -1.39
TRIM41Q8WV44 AC013791.1-201ENST00000616619 62 ntBASIC6.35□□□□□ -1.39
TRIM41Q8WV44 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC6.35□□□□□ -1.39
TRIM41Q8WV44 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM41Q8WV44 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
TRIM41Q8WV44 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM41Q8WV44 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
TRIM41Q8WV44 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM41Q8WV44 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM41Q8WV44 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
TRIM41Q8WV44 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
TRIM41Q8WV44 RNU6-801P-201ENST00000364087 105 ntBASIC6.34□□□□□ -1.39
TRIM41Q8WV44 RNU6-460P-201ENST00000391158 108 ntBASIC6.34□□□□□ -1.39
TRIM41Q8WV44 SNORA26.5-201ENST00000391215 123 ntBASIC6.34□□□□□ -1.39
TRIM41Q8WV44 RPS26P42-201ENST00000413485 326 ntBASIC6.34□□□□□ -1.39
TRIM41Q8WV44 RPL23AP58-201ENST00000440453 469 ntBASIC6.34□□□□□ -1.39
TRIM41Q8WV44 AL121914.1-201ENST00000450188 156 ntBASIC6.34□□□□□ -1.39
TRIM41Q8WV44 RPS4XP13-201ENST00000483219 789 ntBASIC6.34□□□□□ -1.39
TRIM41Q8WV44 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM41Q8WV44 SNORA31.16-201ENST00000516773 139 ntBASIC6.34□□□□□ -1.39
TRIM41Q8WV44 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC6.34□□□□□ -1.39
TRIM41Q8WV44 MIR6134-201ENST00000617606 109 ntBASIC6.34□□□□□ -1.39
TRIM41Q8WV44 NEAT1-202ENST00000501122 22743 ntBASIC6.34□□□□□ -1.39
TRIM41Q8WV44 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
TRIM41Q8WV44 RNU6-778P-201ENST00000363269 103 ntBASIC6.33□□□□□ -1.4
TRIM41Q8WV44 Y_RNA.287-201ENST00000364853 94 ntBASIC6.33□□□□□ -1.4
TRIM41Q8WV44 MIR888-201ENST00000401186 77 ntBASIC6.33□□□□□ -1.4
TRIM41Q8WV44 ATP5A1P2-201ENST00000412323 255 ntBASIC6.33□□□□□ -1.4
TRIM41Q8WV44 RNA5SP76-201ENST00000516277 87 ntBASIC6.33□□□□□ -1.4
TRIM41Q8WV44 AL162713.1-201ENST00000604480 262 ntBASIC6.33□□□□□ -1.4
TRIM41Q8WV44 U2.21-201ENST00000637295 81 ntBASIC6.33□□□□□ -1.4
TRIM41Q8WV44 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM41Q8WV44 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM41Q8WV44 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM41Q8WV44 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM41Q8WV44 MFSD8-236ENST00000641509 4050 ntBASIC6.33□□□□□ -1.4
TRIM41Q8WV44 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM41Q8WV44 AC010329.5-201ENST00000623497 2174 ntBASIC6.33□□□□□ -1.4
TRIM41Q8WV44 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
TRIM41Q8WV44 AC087190.4-201ENST00000574616 8334 ntBASIC6.32□□□□□ -1.4
TRIM41Q8WV44 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
TRIM41Q8WV44 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
TRIM41Q8WV44 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM41Q8WV44 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM41Q8WV44 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM41Q8WV44 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM41Q8WV44 DLEU2_6.3-201ENST00000340052 136 ntBASIC6.32□□□□□ -1.4
TRIM41Q8WV44 RNU6-884P-201ENST00000363889 107 ntBASIC6.32□□□□□ -1.4
TRIM41Q8WV44 RNU6-1048P-201ENST00000364054 107 ntBASIC6.32□□□□□ -1.4
TRIM41Q8WV44 RNU6-245P-201ENST00000384020 107 ntBASIC6.32□□□□□ -1.4
TRIM41Q8WV44 MIR626-201ENST00000385032 94 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms