Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 AC118273.1-201ENST00000525324 3006 ntBASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 SNORD9-201ENST00000362566 104 ntBASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 RNU6-407P-201ENST00000365280 104 ntBASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 RNVU1-14-201ENST00000384770 164 ntBASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 AL590383.1-201ENST00000428602 75 ntBASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 MTATP6P7-201ENST00000453315 681 ntBASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 SNORD105B-201ENST00000458770 79 ntBASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 AC146507.2-201ENST00000460608 476 ntBASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 AC007215.1-201ENST00000464893 276 ntBASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 RNU6-1007P-201ENST00000516586 107 ntBASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 RNU2-56P-201ENST00000516826 190 ntBASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 MIR3646-201ENST00000578301 84 ntBASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 AC010329.5-201ENST00000623497 2174 ntBASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 AC073073.2-201ENST00000609827 2578 ntBASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 AL139811.1-201ENST00000424779 2299 ntBASIC3.86□□□□□ -1.79
SHKBP1Q8TBC3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 AC092268.1-201ENST00000342691 405 ntBASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 MIR423-201ENST00000362201 94 ntBASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 Y_RNA.24-201ENST00000362508 103 ntBASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 RNU6-799P-201ENST00000363567 107 ntBASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 Y_RNA.293-201ENST00000364908 93 ntBASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 RNU6-643P-201ENST00000384018 107 ntBASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 MIR616-201ENST00000385293 97 ntBASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 RNA5SP424-201ENST00000390988 115 ntBASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 RNA5SP475-201ENST00000410568 110 ntBASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 AC012306.1-201ENST00000423267 114 ntBASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 CYCSP4-201ENST00000429682 331 ntBASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 CYCSP35-201ENST00000451978 304 ntBASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 SNORA70.16-201ENST00000516390 95 ntBASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 RNU6-844P-201ENST00000517175 102 ntBASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 AC006380.1-201ENST00000603598 186 ntBASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 AL359198.2-201ENST00000611836 194 ntBASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 U2.21-201ENST00000637295 81 ntBASIC3.85□□□□□ -1.79
SHKBP1Q8TBC3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 IPO8P1-201ENST00000455509 3109 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 ZNF702P-202ENST00000434269 1966 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 RNY1P11-201ENST00000363759 113 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 RNU6-324P-201ENST00000363957 106 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 Y_RNA.287-201ENST00000364853 94 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 RNU6-1180P-201ENST00000364935 107 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 RNU1-100P-201ENST00000365255 165 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 RNU6-245P-201ENST00000384020 107 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 RNU6-140P-201ENST00000384566 108 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 MIR490-201ENST00000384865 128 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 MIR549A-201ENST00000385268 96 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 SNORA26.3-201ENST00000391119 136 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 RNA5SP89-201ENST00000410300 108 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 AC244098.2-201ENST00000422068 99 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 BPY2DP-201ENST00000422208 265 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 AC244670.1-201ENST00000436879 112 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 AC009237.8-201ENST00000445492 379 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 AC010285.1-201ENST00000470580 392 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 HMGB1P22-201ENST00000505315 124 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 RNU1-103P-201ENST00000516502 125 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 NACAP3-201ENST00000552100 481 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 AP000553.6-201ENST00000641242 118 ntBASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
SHKBP1Q8TBC3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
SHKBP1Q8TBC3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SHKBP1Q8TBC3 AC073346.2-201ENST00000624724 2058 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 AL049781.1-201ENST00000623195 3585 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 RNU6-1048P-201ENST00000364054 107 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 RNU6-454P-201ENST00000364292 107 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 Y_RNA.251-201ENST00000364551 99 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 SNORA72.4-201ENST00000384174 132 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 RNU6-768P-201ENST00000384683 107 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 AL138878.1-201ENST00000405131 347 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 AL355497.1-201ENST00000406262 551 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 AL158823.1-201ENST00000418441 478 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 AC092047.1-201ENST00000424997 240 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 AL121914.1-201ENST00000450188 156 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms