Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 MIR432-201ENST00000606207 94 ntBASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 U6.115-201ENST00000636045 103 ntBASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 Z82217.1-201ENST00000625157 8149 ntBASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 Y_RNA.49-201ENST00000362714 112 ntBASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 MIR570-201ENST00000384917 97 ntBASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 RNA5SP390-201ENST00000410191 113 ntBASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 RNA5SP146-201ENST00000410743 123 ntBASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 AC019205.3-201ENST00000424573 156 ntBASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 SNORA59A-201ENST00000459326 152 ntBASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 AC010469.1-201ENST00000463864 576 ntBASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 AC110768.1-201ENST00000509222 400 ntBASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 AL022345.2-201ENST00000606307 135 ntBASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 SNORD11B-201ENST00000607707 90 ntBASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 MIR2052-201ENST00000636055 55 ntBASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 U2.21-201ENST00000637295 81 ntBASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-3Q8TAU0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 SNORD114-7-201ENST00000362520 77 ntBASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 RNU6-508P-201ENST00000363231 103 ntBASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 SNORA7.2-201ENST00000364446 145 ntBASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 RNY1P7-201ENST00000384743 110 ntBASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 Y_RNA.587-201ENST00000391210 103 ntBASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 RN7SKP177-201ENST00000410567 355 ntBASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 Z75741.1-201ENST00000446793 314 ntBASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 AC117454.1-201ENST00000491120 168 ntBASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 RNU1-103P-201ENST00000516502 125 ntBASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 SNORA31.16-201ENST00000516773 139 ntBASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 AC099778.2-201ENST00000610904 211 ntBASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 AC068205.3-201ENST00000636385 468 ntBASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 MIR3529-201ENST00000637713 78 ntBASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-3Q8TAU0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
NKX2-3Q8TAU0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.84□□□□□ -1.64
NKX2-3Q8TAU0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 AL513302.2-201ENST00000562313 1842 ntBASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 RNA5SP136-201ENST00000410906 107 ntBASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 AC092047.1-201ENST00000424997 240 ntBASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 AL365496.1-201ENST00000426885 215 ntBASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 AL445687.1-201ENST00000439946 251 ntBASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 HMGN2P21-201ENST00000447764 270 ntBASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 snoU13.4-201ENST00000458916 104 ntBASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 AC090525.1-201ENST00000479116 478 ntBASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 AC103975.1-201ENST00000482506 483 ntBASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 RNU6-1299P-201ENST00000516316 100 ntBASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 RNA5SP153-201ENST00000516498 76 ntBASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 RNU7-143P-201ENST00000516781 65 ntBASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 RNU1-104P-201ENST00000517280 175 ntBASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 MIR3200-201ENST00000580767 85 ntBASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 AP003357.1-201ENST00000604497 148 ntBASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 Y_RNA.818-201ENST00000618813 71 ntBASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-3Q8TAU0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 ZNF962P-201ENST00000443465 3140 ntBASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 AC016588.2-201ENST00000632484 3021 ntBASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 SNORA73.2-201ENST00000364946 201 ntBASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 Y_RNA.528-201ENST00000384575 108 ntBASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 MIR208B-201ENST00000401172 77 ntBASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 FTH1P15-201ENST00000406984 280 ntBASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 AL021397.1-201ENST00000451806 248 ntBASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 AC090515.1-201ENST00000465295 476 ntBASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 IGKV1-22-201ENST00000524313 326 ntBASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 MIR3136-201ENST00000583498 78 ntBASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 MIR5684-201ENST00000585074 65 ntBASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 AL121772.2-201ENST00000614331 297 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms