Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC009296.1-201ENST00000443146 155 ntBASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 AC112492.4-201ENST00000456549 352 ntBASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 RPL30P1-201ENST00000488676 339 ntBASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 RNA5SP385-201ENST00000515947 110 ntBASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 RNU6-1137P-201ENST00000517073 99 ntBASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 AC104027.1-201ENST00000521887 300 ntBASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 MIR4506-201ENST00000584693 77 ntBASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 RMST_6.1-201ENST00000611980 203 ntBASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 AL132822.1-201ENST00000617063 513 ntBASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 U2.1-201ENST00000618978 145 ntBASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 SNORA43.4-201ENST00000629559 138 ntBASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 AC091812.1-201ENST00000432235 1948 ntBASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 AC110774.1-201ENST00000623567 2018 ntBASIC3.46□□□□□ -1.86
SMC1BQ8NDV3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 AC073325.2-201ENST00000339545 159 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 RNU6-212P-201ENST00000362642 104 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 RNU6-1010P-201ENST00000362757 107 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 Y_RNA.164-201ENST00000363709 102 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 SNORD115-32-201ENST00000364079 82 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 SNORD14.1-201ENST00000365609 90 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 AC096644.2-201ENST00000429278 159 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 AP001324.2-201ENST00000461163 319 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 RNU6-911P-201ENST00000516523 104 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 AC109329.1-201ENST00000518744 317 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 AC245166.1-201ENST00000521012 253 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 MIR5571-201ENST00000577998 113 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 AC087588.2-201ENST00000617667 426 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 AC091903.1-201ENST00000624322 454 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 AL078596.1-201ENST00000624856 447 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 AC110079.1-202ENST00000635213 138 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 MAPK10-322ENST00000641485 4530 ntBASIC3.45□□□□□ -1.86
SMC1BQ8NDV3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 RNU6-1285P-201ENST00000363480 105 ntBASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 SNORD56.3-201ENST00000363507 71 ntBASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 RNY3P11-201ENST00000364153 102 ntBASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 RNU4-56P-201ENST00000364700 142 ntBASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 U3.13-201ENST00000364804 214 ntBASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 Y_RNA.485-201ENST00000384395 102 ntBASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 MIR153-2-201ENST00000385225 87 ntBASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 CYCSP48-201ENST00000417124 323 ntBASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 Z98742.3-201ENST00000418637 326 ntBASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 AL358075.3-201ENST00000426289 226 ntBASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 Z82188.1-201ENST00000436709 154 ntBASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 RNU7-87P-201ENST00000459343 62 ntBASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 AC087477.1-201ENST00000465747 340 ntBASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 AC006483.1-201ENST00000487308 313 ntBASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 RNU6-567P-201ENST00000516746 107 ntBASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 MIR4648-201ENST00000580107 72 ntBASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 AC104695.3-201ENST00000604052 296 ntBASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 MTND5P16-201ENST00000460269 1703 ntBASIC3.44□□□□□ -1.86
SMC1BQ8NDV3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 RNU6-1159P-201ENST00000362933 107 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 RNU5B-2P-201ENST00000363036 113 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 Y_RNA.226-201ENST00000364337 114 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 CD24P4-201ENST00000382840 243 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 MIR32-201ENST00000384965 70 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 Y_RNA.645-201ENST00000391229 102 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 Y_RNA.592-201ENST00000410274 109 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 RNA5SP425-201ENST00000410336 112 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 RNU6-1140P-201ENST00000410517 106 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 AC114482.1-201ENST00000418010 247 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 AL590135.1-201ENST00000422215 156 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 AC019205.3-201ENST00000424573 156 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 AC016700.2-201ENST00000446011 156 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 OR2AQ1P-201ENST00000451972 200 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 TOMM22P6-201ENST00000465035 409 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 AF186996.7-201ENST00000492781 209 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 AC022616.4-201ENST00000522985 181 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 MIR5188-201ENST00000583467 113 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 MIR3136-201ENST00000583498 78 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 AC010928.2-201ENST00000588017 287 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 UCA1.1-201ENST00000620952 75 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 AC138305.3-201ENST00000624988 240 ntBASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.43□□□□□ -1.86
SMC1BQ8NDV3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 FAM35CP-201ENST00000554755 2470 ntBASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 SNORA26.3-201ENST00000391119 136 ntBASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 AC009414.1-201ENST00000427200 443 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms