Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TTC9BQ8N6N2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 RNU4-80P-201ENST00000363200 141 ntBASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 Y_RNA.182-201ENST00000363880 111 ntBASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 RNU6-153P-201ENST00000364422 104 ntBASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 SNORA54-201ENST00000384281 123 ntBASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 SNORA20-201ENST00000384662 132 ntBASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 MIR10B-201ENST00000385011 110 ntBASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 AP000567.1-201ENST00000406413 156 ntBASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 RPS15AP5-201ENST00000436276 388 ntBASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 AC008267.6-201ENST00000441664 139 ntBASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 AC096638.1-201ENST00000444678 216 ntBASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 MLLT10P2-201ENST00000506434 249 ntBASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 RN7SKP49-201ENST00000516675 260 ntBASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 RNA5SP165-201ENST00000517142 115 ntBASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 AC233702.2-202ENST00000562547 291 ntBASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 AC055872.1-201ENST00000570978 278 ntBASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 MIR4782-201ENST00000577987 79 ntBASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 uc_338.25-201ENST00000613756 156 ntBASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 AC092628.2-201ENST00000622492 339 ntBASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.37□□□□□ -1.87
TTC9BQ8N6N2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 MIR422A-201ENST00000362286 90 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 RNA5SP295-201ENST00000362655 121 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 Y_RNA.136-201ENST00000363444 102 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 Y_RNA.217-201ENST00000364214 105 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 RNU6-1286P-201ENST00000383871 107 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 MIR569-201ENST00000385228 96 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 Z85995.1-201ENST00000415547 335 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 AC138623.1-201ENST00000418060 216 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 BTF3P11-201ENST00000426582 477 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 Y_RNA.641-201ENST00000459414 105 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 AP001486.1-201ENST00000463339 476 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 S100A11P2-201ENST00000467589 312 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 KC877373.1-201ENST00000479066 408 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 AC008885.1-201ENST00000514930 301 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 SNORA40.9-201ENST00000515895 93 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 RNU6-1333P-201ENST00000516162 93 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 AL391261.3-201ENST00000557194 520 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 AC005176.2-201ENST00000596933 147 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 AL137843.1-201ENST00000605078 385 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 AL357075.2-201ENST00000614906 189 ntBASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TTC9BQ8N6N2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 Y_RNA.218-201ENST00000364218 104 ntBASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 RNA5SP205-201ENST00000364653 136 ntBASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 Y_RNA.319-201ENST00000365138 92 ntBASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 Y_RNA.357-201ENST00000365487 109 ntBASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 SNORA7.4-201ENST00000384249 137 ntBASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 RNU6-72P-201ENST00000384285 79 ntBASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 RPL27AP5-201ENST00000469428 449 ntBASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 AC021205.2-201ENST00000480069 347 ntBASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 AL049873.1-201ENST00000480540 376 ntBASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 SNORA25.12-201ENST00000516202 82 ntBASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 RNU6-1231P-201ENST00000517185 103 ntBASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 EIF4BP1-201ENST00000554881 351 ntBASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 AL451007.1-201ENST00000595491 289 ntBASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 AL359881.1-201ENST00000602916 267 ntBASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 Y_RNA.778-201ENST00000620203 90 ntBASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 U6.99-201ENST00000637524 83 ntBASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 AC110774.1-201ENST00000623567 2018 ntBASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 CUL1P1-201ENST00000509510 2425 ntBASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.35□□□□□ -1.87
TTC9BQ8N6N2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.87
TTC9BQ8N6N2 SNORD115-32-201ENST00000364079 82 ntBASIC3.34□□□□□ -1.87
TTC9BQ8N6N2 RNU6-173P-201ENST00000364215 104 ntBASIC3.34□□□□□ -1.87
TTC9BQ8N6N2 Y_RNA.238-201ENST00000364441 102 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms