Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 Y_RNA.143-201ENST00000363520 106 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 Y_RNA.352-201ENST00000365439 102 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 RNU6-1062P-201ENST00000383908 107 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 Y_RNA.462-201ENST00000384268 102 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 SNORD78.2-201ENST00000391076 69 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 RNU1-139P-201ENST00000391307 165 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 MIR888-201ENST00000401186 77 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 AL603910.2-201ENST00000407268 136 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 YPEL5P1-201ENST00000419731 367 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 HMGN2P30-201ENST00000423237 256 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 AC063976.3-201ENST00000426849 329 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 EIF1P2-201ENST00000428233 350 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 AC006026.2-201ENST00000457376 180 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 RPL23AP49-201ENST00000492925 468 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 RPS27AP10-201ENST00000496103 208 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 GZMAP1-201ENST00000503054 631 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 SNORA64.4-201ENST00000516632 81 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 RNA5SP468-201ENST00000516782 93 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 Y_RNA.700-201ENST00000516806 100 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 DEFB108E-201ENST00000524692 240 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 AC130289.1-201ENST00000577321 73 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 AC107294.3-201ENST00000609211 526 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 AL450472.1-202ENST00000637286 180 ntBASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SLC44A3Q8N4M1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.09□□□□□ -1.92
SLC44A3Q8N4M1 AC090740.1-201ENST00000623193 2262 ntBASIC3.09□□□□□ -1.92
SLC44A3Q8N4M1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 RNU6-50P-201ENST00000362356 103 ntBASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 RNU6-527P-201ENST00000363425 104 ntBASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 RNU6-102P-201ENST00000384485 104 ntBASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 EIF1AXP1-201ENST00000419267 435 ntBASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 RPL37P4-201ENST00000448908 268 ntBASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 AL139109.1-201ENST00000455491 297 ntBASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 RNU6-496P-201ENST00000516145 99 ntBASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 AC104027.1-201ENST00000521887 300 ntBASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 AC023824.2-201ENST00000566185 400 ntBASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 AC020895.1-201ENST00000595362 272 ntBASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 AL110115.1-201ENST00000614396 364 ntBASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 AC011476.5-201ENST00000615594 130 ntBASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.08□□□□□ -1.92
SLC44A3Q8N4M1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 RNU6-884P-201ENST00000363889 107 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 RNU6-270P-201ENST00000364131 105 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 Y_RNA.274-201ENST00000364714 101 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 U8.10-201ENST00000384260 133 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 SNORD116-20-201ENST00000384529 92 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 Y_RNA.555-201ENST00000384673 110 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 MIR1261-201ENST00000408659 82 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 RNA5SP129-201ENST00000410276 118 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 AC087499.2-201ENST00000432861 149 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 AC124916.1-201ENST00000444020 547 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 AL353705.4-201ENST00000449661 238 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 AP000870.1-201ENST00000472927 406 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 AC022868.1-201ENST00000517767 391 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 CR383656.8-201ENST00000549046 145 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 AC027288.2-201ENST00000553028 243 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 MIR4659A-201ENST00000580269 81 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 Y_RNA.772-201ENST00000606692 102 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 FTX_2.1-201ENST00000618816 94 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 AC127459.3-201ENST00000624328 466 ntBASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.07□□□□□ -1.92
SLC44A3Q8N4M1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 SNORA29-201ENST00000384183 140 ntBASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 RNU6-937P-201ENST00000384325 106 ntBASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 FTH1P15-201ENST00000406984 280 ntBASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 RNU2-20P-201ENST00000410425 191 ntBASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 AL139156.1-201ENST00000412785 841 ntBASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 NDUFS5P4-201ENST00000412983 318 ntBASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 AC009487.2-201ENST00000420969 6821 ntBASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 AL591043.1-201ENST00000432461 424 ntBASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 MTND2P29-201ENST00000438595 412 ntBASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 AC009969.1-201ENST00000438726 172 ntBASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 SSXP4-201ENST00000451349 245 ntBASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 HSPE1P25-201ENST00000455484 251 ntBASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 AC087477.1-201ENST00000465747 340 ntBASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 RNU6-1114P-201ENST00000516022 107 ntBASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 AC016256.1-201ENST00000547971 354 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 202.5 ms