Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.35□□□□□ -1.87
SYNPOQ8N3V7 AC022616.4-201ENST00000522985 181 ntBASIC3.35□□□□□ -1.87
SYNPOQ8N3V7 AL442163.3-201ENST00000554110 156 ntBASIC3.35□□□□□ -1.87
SYNPOQ8N3V7 AC113195.1-201ENST00000579952 141 ntBASIC3.35□□□□□ -1.87
SYNPOQ8N3V7 AL713866.2-201ENST00000603579 219 ntBASIC3.35□□□□□ -1.87
SYNPOQ8N3V7 SNRPGP20-201ENST00000604477 205 ntBASIC3.35□□□□□ -1.87
SYNPOQ8N3V7 MIR5739-201ENST00000619803 80 ntBASIC3.35□□□□□ -1.87
SYNPOQ8N3V7 AL078596.1-201ENST00000624856 447 ntBASIC3.35□□□□□ -1.87
SYNPOQ8N3V7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SYNPOQ8N3V7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SYNPOQ8N3V7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 AC017071.1-201ENST00000564407 2204 ntBASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 RNA5SP361-201ENST00000362686 118 ntBASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 RNU6-1309P-201ENST00000363305 108 ntBASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 RNU6-461P-201ENST00000364195 107 ntBASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 RNU4-50P-201ENST00000364361 141 ntBASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 SNORA18.2-201ENST00000383865 132 ntBASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 Y_RNA.471-201ENST00000384312 102 ntBASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 RNU6-1274P-201ENST00000384557 107 ntBASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 RNU1-139P-201ENST00000391307 165 ntBASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 AC126124.2-201ENST00000413542 321 ntBASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 EIF1P2-201ENST00000428233 350 ntBASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 Z96811.1-201ENST00000445880 108 ntBASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 RN7SL863P-201ENST00000462370 296 ntBASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 AC010401.1-201ENST00000463867 348 ntBASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 MIR449C-201ENST00000516047 92 ntBASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 RNU6-397P-201ENST00000516226 104 ntBASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 AC005520.5-201ENST00000613926 164 ntBASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 7SK.10-201ENST00000621414 298 ntBASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
SYNPOQ8N3V7 AL021368.2-201ENST00000606125 5352 ntBASIC3.34□□□□□ -1.88
SYNPOQ8N3V7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 RNA5SP197-201ENST00000363357 119 ntBASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 RNU6-727P-201ENST00000363592 107 ntBASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 RNU6-574P-201ENST00000384265 107 ntBASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 MIR548F4-201ENST00000408515 105 ntBASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 RNU6-1001P-201ENST00000411265 100 ntBASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 AC107083.1-201ENST00000439643 279 ntBASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 AC096638.1-201ENST00000444678 216 ntBASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 Y_RNA.715-201ENST00000517082 110 ntBASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 AC022080.3-201ENST00000544433 482 ntBASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 MIR5006-201ENST00000583027 110 ntBASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 MIR7106-201ENST00000612419 65 ntBASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 AC138915.1-201ENST00000565427 1685 ntBASIC3.33□□□□□ -1.88
SYNPOQ8N3V7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 Y_RNA.27-201ENST00000362540 103 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 RNU6-1301P-201ENST00000362724 104 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 RNU1-72P-201ENST00000362976 153 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 RNU6-137P-201ENST00000363680 108 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 SNORD115-8-201ENST00000363856 82 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 RNU6-1180P-201ENST00000364935 107 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 SNORD115-38-201ENST00000365037 82 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 SNORA44-201ENST00000384584 132 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 AC112220.1-201ENST00000434628 355 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 AC010095.1-201ENST00000443543 144 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 AC021205.2-201ENST00000480069 347 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 HSPE1P20-201ENST00000538133 289 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 AL117187.1-201ENST00000555482 181 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 AC011476.5-201ENST00000615594 130 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 AC005562.2-201ENST00000618264 111 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 MIR7153-201ENST00000637758 57 ntBASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYNPOQ8N3V7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 RNU1-76P-201ENST00000362903 159 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 Y_RNA.152-201ENST00000363578 100 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 RNU5F-3P-201ENST00000363767 117 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 Y_RNA.210-201ENST00000364161 110 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 SET-203ENST00000372688 801 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms