Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.27□□□□□ -1.73
NPAS3Q8IXF0 RN7SKP234-201ENST00000517173 224 ntBASIC4.27□□□□□ -1.73
NPAS3Q8IXF0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.27□□□□□ -1.73
NPAS3Q8IXF0 AL160236.1-201ENST00000556317 195 ntBASIC4.27□□□□□ -1.73
NPAS3Q8IXF0 MIR5684-201ENST00000585074 65 ntBASIC4.27□□□□□ -1.73
NPAS3Q8IXF0 AC008739.3-201ENST00000603262 127 ntBASIC4.27□□□□□ -1.73
NPAS3Q8IXF0 AC090132.2-201ENST00000615881 347 ntBASIC4.27□□□□□ -1.73
NPAS3Q8IXF0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NPAS3Q8IXF0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.27□□□□□ -1.73
NPAS3Q8IXF0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
NPAS3Q8IXF0 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.27□□□□□ -1.73
NPAS3Q8IXF0 AC107027.3-201ENST00000565095 3473 ntBASIC4.27□□□□□ -1.73
NPAS3Q8IXF0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NPAS3Q8IXF0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
NPAS3Q8IXF0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NPAS3Q8IXF0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 Y_RNA.78-201ENST00000362970 110 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 Y_RNA.124-201ENST00000363339 93 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 RNU6-414P-201ENST00000363705 104 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 RNU6-173P-201ENST00000364215 104 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 DYNLT3P1-201ENST00000378574 347 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 SNORD116-13-201ENST00000384408 92 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 MIR449B-201ENST00000384995 97 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 U3.26-201ENST00000391236 204 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 RNA5SP496-201ENST00000391240 109 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 RNA5SP127-201ENST00000411051 133 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 AC004866.1-201ENST00000411748 78 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 ABCF2P2-201ENST00000450549 296 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 IGKV2D-19-201ENST00000523346 262 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 MED28P6-201ENST00000558776 231 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 AP003357.1-201ENST00000604497 148 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 SNORD11B-201ENST00000607707 90 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 AL121772.2-201ENST00000614331 297 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 AL138721.1-201ENST00000616756 179 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 LINC00901.1-201ENST00000617252 152 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.26□□□□□ -1.73
NPAS3Q8IXF0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 AC106871.1-201ENST00000568324 3102 ntBASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 SNORA60-201ENST00000362396 134 ntBASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 MARK2P15-201ENST00000432204 2186 ntBASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 CKS1BP5-201ENST00000434172 273 ntBASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 MLLT10P2-201ENST00000506434 249 ntBASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 RNU6-162P-201ENST00000516228 103 ntBASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 RNA5SP291-201ENST00000517222 105 ntBASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 SNORD84-203ENST00000584275 78 ntBASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 MIR6868-201ENST00000611215 58 ntBASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 AC027290.2-201ENST00000623210 18662 ntBASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NPAS3Q8IXF0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 AL450326.2-201ENST00000421913 1962 ntBASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 AL161912.2-201ENST00000565707 3007 ntBASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 DEFB108F-201ENST00000344638 222 ntBASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 Y_RNA.265-201ENST00000364677 108 ntBASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 SNORA26.3-201ENST00000391119 136 ntBASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 FTH1P15-201ENST00000406984 280 ntBASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 AL139281.1-201ENST00000422120 335 ntBASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 AC099336.2-201ENST00000422457 254 ntBASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 PTMAP3-201ENST00000447474 330 ntBASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 AC099560.2-201ENST00000457554 255 ntBASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 RPS26P28-201ENST00000470806 348 ntBASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 AC108145.1-201ENST00000503770 153 ntBASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 SNORA31.23-201ENST00000517219 133 ntBASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 AC018692.3-201ENST00000623929 123 ntBASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 AC068205.3-201ENST00000636385 468 ntBASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 AC087190.4-201ENST00000574616 8334 ntBASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NPAS3Q8IXF0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms