Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC026407.1-201ENST00000518369 204 ntBASIC1.53□□□□□ -2.16
CCDC50Q8IVM0 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.53□□□□□ -2.16
CCDC50Q8IVM0 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC50Q8IVM0 AC008269.2-201ENST00000561915 1105 ntBASIC1.53□□□□□ -2.16
CCDC50Q8IVM0 SNORA59B-202ENST00000578183 701 ntBASIC1.53□□□□□ -2.16
CCDC50Q8IVM0 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.53□□□□□ -2.16
CCDC50Q8IVM0 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.53□□□□□ -2.16
CCDC50Q8IVM0 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.53□□□□□ -2.16
CCDC50Q8IVM0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.53□□□□□ -2.16
CCDC50Q8IVM0 AC022079.1-201ENST00000621546 602 ntBASIC1.53□□□□□ -2.16
CCDC50Q8IVM0 AC090582.1-201ENST00000636321 199 ntBASIC1.53□□□□□ -2.16
CCDC50Q8IVM0 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.53□□□□□ -2.16
CCDC50Q8IVM0 Y_RNA.255-201ENST00000364581 97 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 Y_RNA.296-201ENST00000364930 108 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 Y_RNA.409-201ENST00000383990 98 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 MTCO2P18-201ENST00000457151 658 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 snoU13.6-201ENST00000458785 104 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 RNU7-14P-201ENST00000459331 62 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 AC007547.1-201ENST00000462177 490 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 MTCO3P38-201ENST00000468910 766 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 YWHAEP4-201ENST00000505390 198 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 AC108078.1-201ENST00000508073 725 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 AC097473.1-201ENST00000508142 408 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 AC010486.3-201ENST00000511602 785 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 SNORA31.24-201ENST00000517232 57 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 RNU6-323P-201ENST00000521915 107 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 EIF4A1P12-201ENST00000551910 141 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 AC027807.1-201ENST00000559921 996 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 SUB1P4-201ENST00000566062 339 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 AC016925.2-201ENST00000605108 242 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 AL356157.2-201ENST00000605122 111 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 AC064836.2-201ENST00000609491 462 ntBASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC50Q8IVM0 MIR424-201ENST00000362227 98 ntBASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 RNU6-438P-201ENST00000365561 103 ntBASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 SNORA32.2-201ENST00000384049 122 ntBASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 MIR208B-201ENST00000401172 77 ntBASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 AP000275.1-201ENST00000411943 390 ntBASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 CDK8P2-201ENST00000415020 547 ntBASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 SNRPGP13-201ENST00000442212 177 ntBASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 TPTE2P5-203ENST00000458118 728 ntBASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 RNU7-138P-201ENST00000459479 64 ntBASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 AC005908.1-201ENST00000468701 347 ntBASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 AC079140.5-201ENST00000507882 310 ntBASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 SNORA14.1-201ENST00000516113 141 ntBASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 RNU5F-4P-201ENST00000516581 114 ntBASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 AC104576.1-201ENST00000524225 88 ntBASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 CYP4A27P-201ENST00000567218 190 ntBASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 MIR5094-201ENST00000578766 85 ntBASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 AC087683.1-201ENST00000591187 441 ntBASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 AL645939.4-201ENST00000604495 135 ntBASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
CCDC50Q8IVM0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 RNU4-55P-201ENST00000410731 137 ntBASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 MTCO2P3-201ENST00000442543 421 ntBASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 RPS29P23-201ENST00000458635 123 ntBASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 RNU1-131P-201ENST00000458943 161 ntBASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 HMGB1P29-201ENST00000505659 499 ntBASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 SNORA40.12-201ENST00000516329 111 ntBASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 RNU6-548P-201ENST00000517083 115 ntBASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 DEFB131C-201ENST00000528817 165 ntBASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 AC090517.1-201ENST00000569307 266 ntBASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 MTND1P15-201ENST00000579262 949 ntBASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 AC005786.1-201ENST00000588553 154 ntBASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 AL121757.2-201ENST00000611223 313 ntBASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 AC068205.3-201ENST00000636385 468 ntBASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 AC009541.1-201ENST00000438279 2662 ntBASIC1.5□□□□□ -2.17
CCDC50Q8IVM0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 Y_RNA.77-201ENST00000362962 107 ntBASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 RNU4-20P-201ENST00000365601 151 ntBASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 Y_RNA.378-201ENST00000365652 113 ntBASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 NCOR1P3-201ENST00000420479 303 ntBASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 AC012306.1-201ENST00000423267 114 ntBASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 SDAD1P3-201ENST00000427380 333 ntBASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 RPS29P27-201ENST00000463711 170 ntBASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 FAM206BP-201ENST00000510179 541 ntBASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 AC091133.4-201ENST00000511142 308 ntBASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 RNA5SP61-201ENST00000516453 100 ntBASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 RNU6-612P-201ENST00000516909 102 ntBASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 MIR3941-201ENST00000582572 103 ntBASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms