Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF180Q86T96 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF180Q86T96 AC006600.1-201ENST00000572529 153 ntBASIC3.33□□□□□ -1.88
RNF180Q86T96 AC090617.3-201ENST00000573670 475 ntBASIC3.33□□□□□ -1.88
RNF180Q86T96 AL356575.1-201ENST00000603008 283 ntBASIC3.33□□□□□ -1.88
RNF180Q86T96 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF180Q86T96 U2.1-201ENST00000618978 145 ntBASIC3.33□□□□□ -1.88
RNF180Q86T96 MIR4272-201ENST00000635924 64 ntBASIC3.33□□□□□ -1.88
RNF180Q86T96 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF180Q86T96 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF180Q86T96 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF180Q86T96 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RNF180Q86T96 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF180Q86T96 AC080128.1-201ENST00000474389 1917 ntBASIC3.32□□□□□ -1.88
RNF180Q86T96 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF180Q86T96 AC096644.4-201ENST00000563417 2912 ntBASIC3.32□□□□□ -1.88
RNF180Q86T96 Y_RNA.106-201ENST00000363189 100 ntBASIC3.32□□□□□ -1.88
RNF180Q86T96 Y_RNA.158-201ENST00000363651 101 ntBASIC3.32□□□□□ -1.88
RNF180Q86T96 U3.9-201ENST00000363823 204 ntBASIC3.32□□□□□ -1.88
RNF180Q86T96 Y_RNA.424-201ENST00000384063 103 ntBASIC3.32□□□□□ -1.88
RNF180Q86T96 RNU6-1093P-201ENST00000391194 107 ntBASIC3.32□□□□□ -1.88
RNF180Q86T96 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RNF180Q86T96 Y_RNA.592-201ENST00000410274 109 ntBASIC3.32□□□□□ -1.88
RNF180Q86T96 AL160004.2-201ENST00000432935 350 ntBASIC3.32□□□□□ -1.88
RNF180Q86T96 AC108938.1-201ENST00000451204 136 ntBASIC3.32□□□□□ -1.88
RNF180Q86T96 AC023141.11-201ENST00000508864 202 ntBASIC3.32□□□□□ -1.88
RNF180Q86T96 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF180Q86T96 RNU4-77P-201ENST00000516692 156 ntBASIC3.32□□□□□ -1.88
RNF180Q86T96 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF180Q86T96 MIR4425-201ENST00000580572 84 ntBASIC3.32□□□□□ -1.88
RNF180Q86T96 AC016727.2-201ENST00000603988 621 ntBASIC3.32□□□□□ -1.88
RNF180Q86T96 AC008121.3-201ENST00000618726 433 ntBASIC3.32□□□□□ -1.88
RNF180Q86T96 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF180Q86T96 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RNF180Q86T96 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF180Q86T96 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF180Q86T96 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RNF180Q86T96 MTND5P16-201ENST00000460269 1703 ntBASIC3.31□□□□□ -1.88
RNF180Q86T96 snoU2_19.1-201ENST00000362361 80 ntBASIC3.31□□□□□ -1.88
RNF180Q86T96 RNA5SP432-201ENST00000362480 116 ntBASIC3.31□□□□□ -1.88
RNF180Q86T96 RNU6-280P-201ENST00000364145 104 ntBASIC3.31□□□□□ -1.88
RNF180Q86T96 Y_RNA.358-201ENST00000365491 99 ntBASIC3.31□□□□□ -1.88
RNF180Q86T96 SNORA18.3-201ENST00000384122 132 ntBASIC3.31□□□□□ -1.88
RNF180Q86T96 HMGB3P2-201ENST00000411913 584 ntBASIC3.31□□□□□ -1.88
RNF180Q86T96 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.31□□□□□ -1.88
RNF180Q86T96 CYP2C59P-201ENST00000457790 269 ntBASIC3.31□□□□□ -1.88
RNF180Q86T96 RPL23AP70-201ENST00000483361 460 ntBASIC3.31□□□□□ -1.88
RNF180Q86T96 AC145146.1-201ENST00000496370 254 ntBASIC3.31□□□□□ -1.88
RNF180Q86T96 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF180Q86T96 RNU6-1114P-201ENST00000516022 107 ntBASIC3.31□□□□□ -1.88
RNF180Q86T96 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.31□□□□□ -1.88
RNF180Q86T96 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF180Q86T96 AL132822.1-201ENST00000617063 513 ntBASIC3.31□□□□□ -1.88
RNF180Q86T96 AC087588.2-201ENST00000617667 426 ntBASIC3.31□□□□□ -1.88
RNF180Q86T96 AL449363.1-201ENST00000617815 186 ntBASIC3.31□□□□□ -1.88
RNF180Q86T96 MIR5739-201ENST00000619803 80 ntBASIC3.31□□□□□ -1.88
RNF180Q86T96 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF180Q86T96 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RNF180Q86T96 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.3□□□□□ -1.88
RNF180Q86T96 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF180Q86T96 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RNF180Q86T96 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF180Q86T96 MIR30E-201ENST00000362104 92 ntBASIC3.3□□□□□ -1.88
RNF180Q86T96 Y_RNA.145-201ENST00000363527 102 ntBASIC3.3□□□□□ -1.88
RNF180Q86T96 SNORD115-8-201ENST00000363856 82 ntBASIC3.3□□□□□ -1.88
RNF180Q86T96 SNORD115-38-201ENST00000365037 82 ntBASIC3.3□□□□□ -1.88
RNF180Q86T96 U8.10-201ENST00000384260 133 ntBASIC3.3□□□□□ -1.88
RNF180Q86T96 AL139095.1-201ENST00000404326 391 ntBASIC3.3□□□□□ -1.88
RNF180Q86T96 RNA5SP201-201ENST00000410316 124 ntBASIC3.3□□□□□ -1.88
RNF180Q86T96 RPS15AP7-201ENST00000439294 405 ntBASIC3.3□□□□□ -1.88
RNF180Q86T96 AC146507.2-201ENST00000460608 476 ntBASIC3.3□□□□□ -1.88
RNF180Q86T96 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF180Q86T96 AC026470.2-201ENST00000561492 181 ntBASIC3.3□□□□□ -1.88
RNF180Q86T96 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF180Q86T96 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF180Q86T96 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF180Q86T96 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF180Q86T96 AC073325.2-201ENST00000339545 159 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.29□□□□□ -1.88
RNF180Q86T96 RNU4-15P-201ENST00000362613 141 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 RNA5SP240-201ENST00000365355 128 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 SNORA9.2-201ENST00000365361 133 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 RNU1-139P-201ENST00000391307 165 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 RNU6-101P-201ENST00000410323 104 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 RNU6-1328P-201ENST00000410938 106 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 AP000705.1-201ENST00000454567 350 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 AL353752.1-201ENST00000454946 260 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 AP000870.1-201ENST00000472927 406 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 HMGN1P10-201ENST00000474557 553 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 AC092185.1-201ENST00000491371 97 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 RNU6-586P-201ENST00000517265 104 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 EIF4A1P12-201ENST00000551910 141 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.29□□□□□ -1.88
RNF180Q86T96 RPS29P30-201ENST00000600975 111 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 SNRPGP20-201ENST00000604477 205 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 PCGEM1.1-201ENST00000613431 131 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 AC073476.4-201ENST00000628409 72 ntBASIC3.29□□□□□ -1.88
RNF180Q86T96 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF180Q86T96 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms