Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 SNORD114-19-201ENST00000363072 75 ntBASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 Y_RNA.348-201ENST00000365403 103 ntBASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 RNU6-49P-201ENST00000384256 107 ntBASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 Y_RNA.617-201ENST00000410920 90 ntBASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 AL590383.1-201ENST00000428602 75 ntBASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 AC117454.1-201ENST00000491120 168 ntBASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 RN7SL604P-201ENST00000492589 296 ntBASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 SNORA31.8-201ENST00000516327 108 ntBASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 AC093331.1-201ENST00000521474 169 ntBASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 RPL30P11-203ENST00000598995 310 ntBASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 AL356575.1-201ENST00000603008 283 ntBASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 AC140479.6-201ENST00000633535 357 ntBASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 U6.115-201ENST00000636045 103 ntBASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 ASNSP1-201ENST00000518311 1939 ntBASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 AC069528.2-201ENST00000624849 1991 ntBASIC4.22□□□□□ -1.73
FOXR1Q6PIV2 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 RNU6-884P-201ENST00000363889 107 ntBASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 RNU6-1131P-201ENST00000364955 107 ntBASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 RNU6-880P-201ENST00000384526 107 ntBASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 U6atac.2-201ENST00000408644 118 ntBASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 RNU6-554P-201ENST00000410466 106 ntBASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 AL162151.2-201ENST00000448875 158 ntBASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 Y_RNA.649-201ENST00000459077 103 ntBASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 RPS26P45-201ENST00000471748 340 ntBASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 TRAV8-5-201ENST00000537369 341 ntBASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 CYP4A27P-201ENST00000567218 190 ntBASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 AL451007.1-201ENST00000595491 289 ntBASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 AC012468.1-201ENST00000604888 430 ntBASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 AC018692.3-201ENST00000623929 123 ntBASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 SNORD98-201ENST00000636377 67 ntBASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 MIR492-201ENST00000638676 116 ntBASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.21□□□□□ -1.74
FOXR1Q6PIV2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 RNU6-1280P-201ENST00000365211 107 ntBASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 RNU6-217P-201ENST00000384164 104 ntBASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 CBX3P9-201ENST00000402326 552 ntBASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 AL691449.1-201ENST00000426570 421 ntBASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 AL117339.2-201ENST00000430475 180 ntBASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 RPL35AP15-201ENST00000468042 339 ntBASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 RPS29P20-201ENST00000489592 171 ntBASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 RNU1-117P-201ENST00000517041 158 ntBASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 AC009163.5-201ENST00000575421 637 ntBASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 AC090897.2-201ENST00000581715 130 ntBASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 AC006130.2-201ENST00000586202 326 ntBASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 SNRPGP20-201ENST00000604477 205 ntBASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 AL162713.1-201ENST00000604480 262 ntBASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 AC006133.1-201ENST00000617106 264 ntBASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 MIR6875-201ENST00000617506 72 ntBASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
FOXR1Q6PIV2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 Y_RNA.120-201ENST00000363304 110 ntBASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 RNU6-309P-201ENST00000364573 106 ntBASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 RNU6-622P-201ENST00000384272 103 ntBASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 AC245047.4-201ENST00000433189 144 ntBASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 HSPE1P21-201ENST00000438283 308 ntBASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 RN7SL542P-201ENST00000467147 294 ntBASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 MIR4644-201ENST00000579929 84 ntBASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 MIR4286-201ENST00000580651 93 ntBASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 SNRPGP15-201ENST00000600149 222 ntBASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 AC025754.2-201ENST00000606491 432 ntBASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 AC244205.2-202ENST00000635781 342 ntBASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
FOXR1Q6PIV2 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms