Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 EI24P2-201ENST00000397776 1076 ntBASIC4.14□□□□□ -1.75
PRPF40BQ6NWY9 RNU2-61P-201ENST00000411069 191 ntBASIC4.14□□□□□ -1.75
PRPF40BQ6NWY9 AC012306.1-201ENST00000423267 114 ntBASIC4.14□□□□□ -1.75
PRPF40BQ6NWY9 AC019205.3-201ENST00000424573 156 ntBASIC4.14□□□□□ -1.75
PRPF40BQ6NWY9 AC107393.1-201ENST00000512403 346 ntBASIC4.14□□□□□ -1.75
PRPF40BQ6NWY9 NDUFB9P3-201ENST00000521269 501 ntBASIC4.14□□□□□ -1.75
PRPF40BQ6NWY9 AC087441.2-201ENST00000529141 262 ntBASIC4.14□□□□□ -1.75
PRPF40BQ6NWY9 AC090897.2-201ENST00000581715 130 ntBASIC4.14□□□□□ -1.75
PRPF40BQ6NWY9 AC008749.1-201ENST00000597650 306 ntBASIC4.14□□□□□ -1.75
PRPF40BQ6NWY9 AC002076.2-201ENST00000617362 122 ntBASIC4.14□□□□□ -1.75
PRPF40BQ6NWY9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRPF40BQ6NWY9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRPF40BQ6NWY9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.14□□□□□ -1.75
PRPF40BQ6NWY9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.14□□□□□ -1.75
PRPF40BQ6NWY9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.14□□□□□ -1.75
PRPF40BQ6NWY9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 MIR30E-201ENST00000362104 92 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 RNU1-35P-201ENST00000362782 153 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 RNU6-1020P-201ENST00000363684 107 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 RNU6-961P-201ENST00000363893 105 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 Y_RNA.292-201ENST00000364904 97 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 Y_RNA.464-201ENST00000384282 110 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 RNA5SP390-201ENST00000410191 113 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 RPL23AP36-201ENST00000413895 458 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 RPL23AP82-202ENST00000427528 469 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 AC107083.1-201ENST00000439643 279 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 COX6CP14-201ENST00000469580 174 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 AC107626.1-201ENST00000471084 183 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 AP001025.1-201ENST00000486139 332 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 SNORA70.19-201ENST00000516717 90 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 MIR2276-201ENST00000516886 89 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 TGIF1P1-201ENST00000558095 802 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 AC006023.1-201ENST00000603944 259 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 AC093732.2-201ENST00000607950 274 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 RNVU1-4-201ENST00000612985 164 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 AL513302.2-201ENST00000562313 1842 ntBASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF40BQ6NWY9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 MIR410-201ENST00000362222 80 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 RNU4-56P-201ENST00000364700 142 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 Y_RNA.275-201ENST00000364726 110 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 RNU6-487P-201ENST00000365430 104 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 RNU6-746P-201ENST00000384112 109 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 PCNPP3-201ENST00000393579 471 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 AC112220.1-201ENST00000434628 355 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 AC010095.1-201ENST00000443543 144 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 UQCRBP2-201ENST00000447827 297 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 RPL30P14-201ENST00000482744 348 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 AC091959.1-201ENST00000495857 238 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 SNORD116-28-201ENST00000516123 91 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 RNU6-1231P-201ENST00000517185 103 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 AC115990.1-201ENST00000526957 301 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 HMGN2P15-201ENST00000585707 270 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 uc_338.32-201ENST00000615087 172 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 AC068831.7-201ENST00000616954 363 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 AL137790.1-201ENST00000634283 177 ntBASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
PRPF40BQ6NWY9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 SNORA5B-201ENST00000363786 132 ntBASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 RNU6-662P-201ENST00000384253 104 ntBASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 COX6CP10-201ENST00000416832 224 ntBASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 AL161651.1-201ENST00000440882 223 ntBASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 MRPS10P1-201ENST00000448483 130 ntBASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 RPL23AP3-201ENST00000453844 468 ntBASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 RN7SL863P-201ENST00000462370 296 ntBASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 Y_RNA.683-201ENST00000516508 93 ntBASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 MIR4425-201ENST00000580572 84 ntBASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms