Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.77□□□□□ -1.65
RC3H1Q5TC82 RNA5SP50-201ENST00000363731 107 ntBASIC4.77□□□□□ -1.65
RC3H1Q5TC82 RNU1-33P-201ENST00000364249 162 ntBASIC4.77□□□□□ -1.65
RC3H1Q5TC82 SNORA18.3-201ENST00000384122 132 ntBASIC4.77□□□□□ -1.65
RC3H1Q5TC82 AC009237.8-201ENST00000445492 379 ntBASIC4.77□□□□□ -1.65
RC3H1Q5TC82 RN7SL807P-201ENST00000470923 297 ntBASIC4.77□□□□□ -1.65
RC3H1Q5TC82 RNU6-1061P-201ENST00000516530 99 ntBASIC4.77□□□□□ -1.65
RC3H1Q5TC82 SNORA31.20-201ENST00000517111 133 ntBASIC4.77□□□□□ -1.65
RC3H1Q5TC82 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.77□□□□□ -1.65
RC3H1Q5TC82 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.77□□□□□ -1.65
RC3H1Q5TC82 AC015813.4-201ENST00000610469 179 ntBASIC4.77□□□□□ -1.65
RC3H1Q5TC82 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.77□□□□□ -1.65
RC3H1Q5TC82 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.77□□□□□ -1.65
RC3H1Q5TC82 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RC3H1Q5TC82 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RC3H1Q5TC82 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RC3H1Q5TC82 SNORD9-201ENST00000362566 104 ntBASIC4.76□□□□□ -1.65
RC3H1Q5TC82 SNORA12.1-201ENST00000390873 148 ntBASIC4.76□□□□□ -1.65
RC3H1Q5TC82 RPL23AP48-201ENST00000406913 488 ntBASIC4.76□□□□□ -1.65
RC3H1Q5TC82 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.76□□□□□ -1.65
RC3H1Q5TC82 SNORA71B-202ENST00000439232 272 ntBASIC4.76□□□□□ -1.65
RC3H1Q5TC82 RNU7-141P-201ENST00000459304 62 ntBASIC4.76□□□□□ -1.65
RC3H1Q5TC82 AC008155.2-201ENST00000464337 397 ntBASIC4.76□□□□□ -1.65
RC3H1Q5TC82 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.76□□□□□ -1.65
RC3H1Q5TC82 RNU1-103P-201ENST00000516502 125 ntBASIC4.76□□□□□ -1.65
RC3H1Q5TC82 RNU6-107P-201ENST00000516643 102 ntBASIC4.76□□□□□ -1.65
RC3H1Q5TC82 IGLV3-26-201ENST00000520756 302 ntBASIC4.76□□□□□ -1.65
RC3H1Q5TC82 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.76□□□□□ -1.65
RC3H1Q5TC82 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.76□□□□□ -1.65
RC3H1Q5TC82 MIR4724-201ENST00000579485 89 ntBASIC4.76□□□□□ -1.65
RC3H1Q5TC82 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.76□□□□□ -1.65
RC3H1Q5TC82 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.76□□□□□ -1.65
RC3H1Q5TC82 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.76□□□□□ -1.65
RC3H1Q5TC82 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RC3H1Q5TC82 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RC3H1Q5TC82 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.76□□□□□ -1.65
RC3H1Q5TC82 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RC3H1Q5TC82 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RC3H1Q5TC82 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RC3H1Q5TC82 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
RC3H1Q5TC82 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RC3H1Q5TC82 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RC3H1Q5TC82 RNU6-1164P-201ENST00000364428 107 ntBASIC4.75□□□□□ -1.65
RC3H1Q5TC82 RNU1-100P-201ENST00000365255 165 ntBASIC4.75□□□□□ -1.65
RC3H1Q5TC82 Y_RNA.341-201ENST00000365341 102 ntBASIC4.75□□□□□ -1.65
RC3H1Q5TC82 Y_RNA.456-201ENST00000384232 111 ntBASIC4.75□□□□□ -1.65
RC3H1Q5TC82 AL512604.1-201ENST00000404812 257 ntBASIC4.75□□□□□ -1.65
RC3H1Q5TC82 MIR320B2-201ENST00000408479 138 ntBASIC4.75□□□□□ -1.65
RC3H1Q5TC82 RNA5SP120-201ENST00000410900 112 ntBASIC4.75□□□□□ -1.65
RC3H1Q5TC82 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.75□□□□□ -1.65
RC3H1Q5TC82 AC115115.1-201ENST00000449927 248 ntBASIC4.75□□□□□ -1.65
RC3H1Q5TC82 RPL26P9-201ENST00000457466 433 ntBASIC4.75□□□□□ -1.65
RC3H1Q5TC82 RAC1P2-201ENST00000511164 579 ntBASIC4.75□□□□□ -1.65
RC3H1Q5TC82 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.75□□□□□ -1.65
RC3H1Q5TC82 SNORA31.23-201ENST00000517219 133 ntBASIC4.75□□□□□ -1.65
RC3H1Q5TC82 RNU2-60P-201ENST00000517290 128 ntBASIC4.75□□□□□ -1.65
RC3H1Q5TC82 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.75□□□□□ -1.65
RC3H1Q5TC82 AC025946.2-201ENST00000603398 234 ntBASIC4.75□□□□□ -1.65
RC3H1Q5TC82 AC004832.5-201ENST00000608677 401 ntBASIC4.75□□□□□ -1.65
RC3H1Q5TC82 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RC3H1Q5TC82 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RC3H1Q5TC82 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.75□□□□□ -1.65
RC3H1Q5TC82 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RC3H1Q5TC82 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.75□□□□□ -1.65
RC3H1Q5TC82 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RC3H1Q5TC82 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
RC3H1Q5TC82 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RC3H1Q5TC82 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
RC3H1Q5TC82 AC092435.4-201ENST00000623012 4159 ntBASIC4.74□□□□□ -1.65
RC3H1Q5TC82 Y_RNA.310-201ENST00000365063 113 ntBASIC4.74□□□□□ -1.65
RC3H1Q5TC82 RNU6-144P-201ENST00000383951 107 ntBASIC4.74□□□□□ -1.65
RC3H1Q5TC82 RNU6-140P-201ENST00000384566 108 ntBASIC4.74□□□□□ -1.65
RC3H1Q5TC82 RNU6-855P-201ENST00000410395 104 ntBASIC4.74□□□□□ -1.65
RC3H1Q5TC82 AC125238.1-201ENST00000448842 249 ntBASIC4.74□□□□□ -1.65
RC3H1Q5TC82 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.74□□□□□ -1.65
RC3H1Q5TC82 AC120024.3-201ENST00000603167 156 ntBASIC4.74□□□□□ -1.65
RC3H1Q5TC82 YPEL5P2-201ENST00000605553 359 ntBASIC4.74□□□□□ -1.65
RC3H1Q5TC82 MIR6134-201ENST00000617606 109 ntBASIC4.74□□□□□ -1.65
RC3H1Q5TC82 AL121890.5-201ENST00000620848 304 ntBASIC4.74□□□□□ -1.65
RC3H1Q5TC82 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RC3H1Q5TC82 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RC3H1Q5TC82 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RC3H1Q5TC82 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.74□□□□□ -1.65
RC3H1Q5TC82 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RC3H1Q5TC82 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RC3H1Q5TC82 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RC3H1Q5TC82 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RC3H1Q5TC82 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
RC3H1Q5TC82 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RC3H1Q5TC82 MIR367-201ENST00000362299 68 ntBASIC4.73□□□□□ -1.65
RC3H1Q5TC82 Y_RNA.114-201ENST00000363265 113 ntBASIC4.73□□□□□ -1.65
RC3H1Q5TC82 U8.6-201ENST00000364939 135 ntBASIC4.73□□□□□ -1.65
RC3H1Q5TC82 Y_RNA.415-201ENST00000384012 112 ntBASIC4.73□□□□□ -1.65
RC3H1Q5TC82 RNY3P5-201ENST00000384127 102 ntBASIC4.73□□□□□ -1.65
RC3H1Q5TC82 SNORA20B-201ENST00000384220 132 ntBASIC4.73□□□□□ -1.65
RC3H1Q5TC82 SNORA26.2-201ENST00000390922 122 ntBASIC4.73□□□□□ -1.65
RC3H1Q5TC82 RNY4P29-201ENST00000410801 97 ntBASIC4.73□□□□□ -1.65
RC3H1Q5TC82 CKS1BP7-201ENST00000522230 235 ntBASIC4.73□□□□□ -1.65
RC3H1Q5TC82 CYP4A43P-201ENST00000568156 121 ntBASIC4.73□□□□□ -1.65
RC3H1Q5TC82 SNRPGP20-201ENST00000604477 205 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms