Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSRP1Q08945 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SSRP1Q08945 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSRP1Q08945 MIR22-201ENST00000362190 85 ntBASIC3.53□□□□□ -1.84
SSRP1Q08945 RNU6-280P-201ENST00000364145 104 ntBASIC3.53□□□□□ -1.84
SSRP1Q08945 RNU6-26P-201ENST00000383985 107 ntBASIC3.53□□□□□ -1.84
SSRP1Q08945 RNU6-574P-201ENST00000384265 107 ntBASIC3.53□□□□□ -1.84
SSRP1Q08945 SNORD78.2-201ENST00000391076 69 ntBASIC3.53□□□□□ -1.84
SSRP1Q08945 RNU6-1093P-201ENST00000391194 107 ntBASIC3.53□□□□□ -1.84
SSRP1Q08945 RPL21P3-201ENST00000395517 478 ntBASIC3.53□□□□□ -1.84
SSRP1Q08945 WARS2P1-201ENST00000429678 537 ntBASIC3.53□□□□□ -1.84
SSRP1Q08945 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.53□□□□□ -1.84
SSRP1Q08945 RPS3P1-201ENST00000456781 192 ntBASIC3.53□□□□□ -1.84
SSRP1Q08945 RPS29P12-201ENST00000460178 152 ntBASIC3.53□□□□□ -1.84
SSRP1Q08945 AC146507.2-201ENST00000460608 476 ntBASIC3.53□□□□□ -1.84
SSRP1Q08945 AC067942.3-201ENST00000512025 362 ntBASIC3.53□□□□□ -1.84
SSRP1Q08945 RNU6-397P-201ENST00000516226 104 ntBASIC3.53□□□□□ -1.84
SSRP1Q08945 SNORA40.15-201ENST00000516884 107 ntBASIC3.53□□□□□ -1.84
SSRP1Q08945 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.53□□□□□ -1.84
SSRP1Q08945 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.53□□□□□ -1.84
SSRP1Q08945 RNU6-486P-201ENST00000363116 107 ntBASIC3.52□□□□□ -1.85
SSRP1Q08945 Y_RNA.452-201ENST00000384202 108 ntBASIC3.52□□□□□ -1.85
SSRP1Q08945 Y_RNA.458-201ENST00000384240 102 ntBASIC3.52□□□□□ -1.85
SSRP1Q08945 RNA5SP201-201ENST00000410316 124 ntBASIC3.52□□□□□ -1.85
SSRP1Q08945 EIF4EP4-201ENST00000424916 578 ntBASIC3.52□□□□□ -1.85
SSRP1Q08945 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.52□□□□□ -1.85
SSRP1Q08945 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.52□□□□□ -1.85
SSRP1Q08945 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.52□□□□□ -1.85
SSRP1Q08945 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.52□□□□□ -1.85
SSRP1Q08945 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.52□□□□□ -1.85
SSRP1Q08945 AC007215.1-201ENST00000464893 276 ntBASIC3.52□□□□□ -1.85
SSRP1Q08945 SEM1P1-201ENST00000506694 209 ntBASIC3.52□□□□□ -1.85
SSRP1Q08945 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.52□□□□□ -1.85
SSRP1Q08945 Y_RNA.713-201ENST00000517013 96 ntBASIC3.52□□□□□ -1.85
SSRP1Q08945 AL161670.1-201ENST00000554348 137 ntBASIC3.52□□□□□ -1.85
SSRP1Q08945 MIR3149-201ENST00000584629 83 ntBASIC3.52□□□□□ -1.85
SSRP1Q08945 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.52□□□□□ -1.85
SSRP1Q08945 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.52□□□□□ -1.85
SSRP1Q08945 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSRP1Q08945 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSRP1Q08945 AC026241.1-201ENST00000517873 2142 ntBASIC3.52□□□□□ -1.85
SSRP1Q08945 AC110774.1-201ENST00000623567 2018 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SSRP1Q08945 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SSRP1Q08945 AC073325.2-201ENST00000339545 159 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 RNU4-15P-201ENST00000362613 141 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 RNU5F-3P-201ENST00000363767 117 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 Y_RNA.214-201ENST00000364201 112 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 RNU6-281P-201ENST00000384212 103 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 RNU6-611P-201ENST00000384276 104 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 RNU6-318P-201ENST00000384283 103 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 RNU6-713P-201ENST00000384761 107 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 Z92545.1-201ENST00000411782 234 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 IPO7P1-201ENST00000442031 636 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 AL731563.1-201ENST00000442202 214 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.51□□□□□ -1.85
SSRP1Q08945 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.51□□□□□ -1.85
SSRP1Q08945 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.51□□□□□ -1.85
SSRP1Q08945 AC008885.1-201ENST00000514930 301 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 RNU6-1143P-201ENST00000516125 104 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 RNU6-1012P-201ENST00000516606 109 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 RNU6-897P-201ENST00000517135 105 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.51□□□□□ -1.85
SSRP1Q08945 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 AC093023.1-201ENST00000547375 507 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.51□□□□□ -1.85
SSRP1Q08945 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
SSRP1Q08945 AC125232.2-201ENST00000592457 143 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 AL356575.1-201ENST00000603008 283 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 PCGEM1.1-201ENST00000613431 131 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 AC010205.1-201ENST00000616668 449 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 U4.1-201ENST00000620349 87 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 AC007318.2-201ENST00000620999 243 ntBASIC3.51□□□□□ -1.85
SSRP1Q08945 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.51□□□□□ -1.85
SSRP1Q08945 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SSRP1Q08945 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.51□□□□□ -1.85
SSRP1Q08945 RNA5SP374-201ENST00000362939 125 ntBASIC3.5□□□□□ -1.85
SSRP1Q08945 RNU6-873P-201ENST00000363833 107 ntBASIC3.5□□□□□ -1.85
SSRP1Q08945 SNORA54-201ENST00000384281 123 ntBASIC3.5□□□□□ -1.85
SSRP1Q08945 RNU6-378P-201ENST00000384324 107 ntBASIC3.5□□□□□ -1.85
SSRP1Q08945 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SSRP1Q08945 RN7SKP220-201ENST00000410611 288 ntBASIC3.5□□□□□ -1.85
SSRP1Q08945 RNU6-130P-201ENST00000411112 103 ntBASIC3.5□□□□□ -1.85
SSRP1Q08945 ELOCP20-201ENST00000422460 345 ntBASIC3.5□□□□□ -1.85
SSRP1Q08945 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.5□□□□□ -1.85
SSRP1Q08945 AL445305.1-201ENST00000432577 575 ntBASIC3.5□□□□□ -1.85
SSRP1Q08945 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.5□□□□□ -1.85
SSRP1Q08945 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.5□□□□□ -1.85
SSRP1Q08945 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.5□□□□□ -1.85
SSRP1Q08945 DYNLT3P2-201ENST00000442517 295 ntBASIC3.5□□□□□ -1.85
SSRP1Q08945 RN7SL75P-201ENST00000461926 281 ntBASIC3.5□□□□□ -1.85
SSRP1Q08945 RPL27AP5-201ENST00000469428 449 ntBASIC3.5□□□□□ -1.85
SSRP1Q08945 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.5□□□□□ -1.85
SSRP1Q08945 AC027176.1-201ENST00000560204 514 ntBASIC3.5□□□□□ -1.85
SSRP1Q08945 AC004817.2-201ENST00000561794 651 ntBASIC3.5□□□□□ -1.85
SSRP1Q08945 MIR3651-201ENST00000630427 90 ntBASIC3.5□□□□□ -1.85
SSRP1Q08945 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SSRP1Q08945 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SSRP1Q08945 BX322639.1-202ENST00000423987 2213 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms