Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 IFNA20P-201ENST00000436840 528 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.98□□□□□ -2.09
GABPAQ06546 AL137159.1-201ENST00000452808 512 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 AC016632.1-201ENST00000503994 196 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 AC092436.3-201ENST00000511788 257 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 MIR514B-201ENST00000516774 80 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 RNU6-612P-201ENST00000516909 102 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.98□□□□□ -2.09
GABPAQ06546 AC109635.3-201ENST00000529536 185 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 TRAV32-201ENST00000553993 340 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 ZNF519P2-201ENST00000557032 169 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 MIR4303-201ENST00000581299 66 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 MIR502-201ENST00000606349 86 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 AC068944.2-201ENST00000610373 403 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.98□□□□□ -2.09
GABPAQ06546 AL359851.1-201ENST00000569460 4997 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 MTND4P23-201ENST00000447723 1363 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 AC121333.1-201ENST00000567488 2709 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 AC009541.1-201ENST00000438279 2662 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
GABPAQ06546 RNU6-451P-201ENST00000362921 107 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 RNU6-1252P-201ENST00000363054 104 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 SNORD115-3-201ENST00000363100 82 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 Y_RNA.140-201ENST00000363474 103 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 SNORA67.5-201ENST00000391036 107 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 SNORA12-201ENST00000391162 147 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 RN7SKP61-201ENST00000410642 295 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 RNU2-48P-201ENST00000410694 191 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 AP000275.1-201ENST00000411943 390 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 HMGN2P19-201ENST00000425149 265 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 CBX3P6-201ENST00000430257 527 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 AL133396.1-201ENST00000432048 687 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 AMD1P1-201ENST00000457220 922 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 AC107032.1-201ENST00000485945 480 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.97□□□□□ -2.09
GABPAQ06546 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.97□□□□□ -2.09
GABPAQ06546 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.97□□□□□ -2.09
GABPAQ06546 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.97□□□□□ -2.09
GABPAQ06546 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.97□□□□□ -2.09
GABPAQ06546 TPRKBP2-201ENST00000565969 475 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 BNIP3P25-201ENST00000596023 559 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 SNRPGP17-201ENST00000603780 214 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 AL132822.1-201ENST00000617063 513 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.97□□□□□ -2.09
GABPAQ06546 AC139792.2-201ENST00000624218 587 ntBASIC1.97□□□□□ -2.09
GABPAQ06546 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
GABPAQ06546 AC092268.1-201ENST00000342691 405 ntBASIC1.96□□□□□ -2.1
GABPAQ06546 RNY4P14-201ENST00000363656 96 ntBASIC1.96□□□□□ -2.1
GABPAQ06546 RNU6-1317P-201ENST00000364582 104 ntBASIC1.96□□□□□ -2.1
GABPAQ06546 RNU6-611P-201ENST00000384276 104 ntBASIC1.96□□□□□ -2.1
GABPAQ06546 RPL23AP95-201ENST00000426806 265 ntBASIC1.96□□□□□ -2.1
GABPAQ06546 MTND3P9-201ENST00000429526 346 ntBASIC1.96□□□□□ -2.1
GABPAQ06546 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.96□□□□□ -2.1
GABPAQ06546 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.96□□□□□ -2.1
GABPAQ06546 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.96□□□□□ -2.1
GABPAQ06546 PRELID3BP1-201ENST00000457142 540 ntBASIC1.96□□□□□ -2.1
GABPAQ06546 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.96□□□□□ -2.1
GABPAQ06546 AC025465.4-201ENST00000513422 638 ntBASIC1.96□□□□□ -2.1
GABPAQ06546 MIR449C-201ENST00000516047 92 ntBASIC1.96□□□□□ -2.1
GABPAQ06546 RNA5SP137-201ENST00000516833 135 ntBASIC1.96□□□□□ -2.1
GABPAQ06546 SNORA31.25-201ENST00000517242 134 ntBASIC1.96□□□□□ -2.1
GABPAQ06546 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.96□□□□□ -2.1
GABPAQ06546 MIR3923-201ENST00000579521 83 ntBASIC1.96□□□□□ -2.1
GABPAQ06546 AC078795.3-201ENST00000602913 472 ntBASIC1.96□□□□□ -2.1
GABPAQ06546 MIR1248-201ENST00000629190 106 ntBASIC1.96□□□□□ -2.1
GABPAQ06546 AC024614.3-201ENST00000637860 256 ntBASIC1.96□□□□□ -2.1
GABPAQ06546 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
GABPAQ06546 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.95□□□□□ -2.1
GABPAQ06546 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
GABPAQ06546 RNU6-254P-201ENST00000363377 107 ntBASIC1.95□□□□□ -2.1
GABPAQ06546 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
GABPAQ06546 Y_RNA.450-201ENST00000384198 113 ntBASIC1.95□□□□□ -2.1
GABPAQ06546 SNORA36A-201ENST00000384221 132 ntBASIC1.95□□□□□ -2.1
GABPAQ06546 MIR17-201ENST00000385012 84 ntBASIC1.95□□□□□ -2.1
GABPAQ06546 RNU4-62P-201ENST00000410125 130 ntBASIC1.95□□□□□ -2.1
GABPAQ06546 MTCO1P21-201ENST00000416634 589 ntBASIC1.95□□□□□ -2.1
GABPAQ06546 NDUFA5P4-201ENST00000436704 385 ntBASIC1.95□□□□□ -2.1
GABPAQ06546 RN7SKP210-201ENST00000459176 261 ntBASIC1.95□□□□□ -2.1
GABPAQ06546 U8.21-201ENST00000459536 136 ntBASIC1.95□□□□□ -2.1
GABPAQ06546 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.95□□□□□ -2.1
GABPAQ06546 Y_RNA.665-201ENST00000516177 98 ntBASIC1.95□□□□□ -2.1
GABPAQ06546 AC018630.3-201ENST00000542637 96 ntBASIC1.95□□□□□ -2.1
GABPAQ06546 AC026371.1-201ENST00000551867 419 ntBASIC1.95□□□□□ -2.1
GABPAQ06546 AC109446.1-201ENST00000566172 220 ntBASIC1.95□□□□□ -2.1
GABPAQ06546 MIR3618-201ENST00000580330 88 ntBASIC1.95□□□□□ -2.1
GABPAQ06546 MIR4448-201ENST00000584360 86 ntBASIC1.95□□□□□ -2.1
GABPAQ06546 AL078605.1-201ENST00000603529 500 ntBASIC1.95□□□□□ -2.1
GABPAQ06546 CTHRC1P1-201ENST00000605383 469 ntBASIC1.95□□□□□ -2.1
GABPAQ06546 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
GABPAQ06546 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
GABPAQ06546 RNU6-227P-201ENST00000362865 103 ntBASIC1.94□□□□□ -2.1
GABPAQ06546 SNORD113-7-201ENST00000363762 77 ntBASIC1.94□□□□□ -2.1
GABPAQ06546 Y_RNA.256-201ENST00000364594 104 ntBASIC1.94□□□□□ -2.1
GABPAQ06546 HMGN2P39-201ENST00000398005 273 ntBASIC1.94□□□□□ -2.1
GABPAQ06546 RNU2-40P-201ENST00000410833 196 ntBASIC1.94□□□□□ -2.1
GABPAQ06546 AL356379.1-201ENST00000414105 126 ntBASIC1.94□□□□□ -2.1
GABPAQ06546 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.94□□□□□ -2.1
GABPAQ06546 UBE2V1P4-201ENST00000425374 344 ntBASIC1.94□□□□□ -2.1
GABPAQ06546 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.94□□□□□ -2.1
GABPAQ06546 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms