Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.19□□□□□ -2.44
PRKDCP78527 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.19□□□□□ -2.44
PRKDCP78527 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 AC130324.3-201ENST00000614165 542 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 RNU6-657P-201ENST00000383904 107 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 RNY1P8-201ENST00000383970 114 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 RNU6-637P-201ENST00000384050 107 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
PRKDCP78527 AL451054.2-201ENST00000420896 202 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 TIMM9P1-201ENST00000436122 256 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 RNU6-586P-201ENST00000517265 104 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-0.2□□□□□ -2.44
PRKDCP78527 AC021231.3-201ENST00000558497 370 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.2□□□□□ -2.44
PRKDCP78527 AC112187.2-201ENST00000604345 283 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.2□□□□□ -2.44
PRKDCP78527 AC009268.2-201ENST00000621925 457 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 AC120349.3-201ENST00000624377 529 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 AC011233.1-201ENST00000422812 283 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 AC007919.1-201ENST00000429380 217 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.2□□□□□ -2.44
PRKDCP78527 AC013828.1-201ENST00000481845 158 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.2□□□□□ -2.44
PRKDCP78527 AC048346.1-201ENST00000510247 144 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 AC074344.1-201ENST00000512823 224 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.2□□□□□ -2.44
PRKDCP78527 RNU6-165P-201ENST00000517170 99 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 RNA5SP437-201ENST00000517249 129 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
PRKDCP78527 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-0.2□□□□□ -2.44
PRKDCP78527 MTND1P15-201ENST00000579262 949 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 AC087685.1-201ENST00000587507 141 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 AC084824.4-201ENST00000620106 731 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 AC015726.2-201ENST00000620112 122 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 SNORD3E-202ENST00000627253 216 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 MTND4P21-201ENST00000453886 1357 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 SNORD114-5-201ENST00000362928 70 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 RNU6-778P-201ENST00000363269 103 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 SNORA40C-201ENST00000391285 128 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 SNORA75.6-201ENST00000391318 127 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 RNA5SP504-201ENST00000410676 117 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 MTND1P30-201ENST00000441241 901 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 AC104982.1-201ENST00000478775 574 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
PRKDCP78527 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.2□□□□□ -2.44
PRKDCP78527 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-0.2□□□□□ -2.44
PRKDCP78527 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.2□□□□□ -2.44
PRKDCP78527 SUB1P2-201ENST00000556401 297 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 AC092608.3-201ENST00000625017 386 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-0.2□□□□□ -2.44
PRKDCP78527 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
PRKDCP78527 MIR4788-201ENST00000639104 80 ntBASIC-0.2□□□□□ -2.44
PRKDCP78527 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 SUMO1P1-201ENST00000497904 306 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 AC027338.1-201ENST00000514840 825 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 SNORD79.1-201ENST00000516069 84 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 RNU2-12P-201ENST00000517216 168 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.21□□□□□ -2.44
PRKDCP78527 AC024995.1-201ENST00000523014 93 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 AC131055.1-201ENST00000584626 316 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 AL391001.1-201ENST00000602747 715 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
PRKDCP78527 AC092268.1-201ENST00000342691 405 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 MIR103A1-201ENST00000362165 78 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 RNA5SP493-201ENST00000364115 91 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 SNORD31B-201ENST00000364977 69 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 RNU6-152P-201ENST00000384037 107 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 SNORD4A-201ENST00000459174 72 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 AC114981.1-201ENST00000503897 678 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 RNU6-390P-201ENST00000516259 103 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 RNU6-947P-201ENST00000516264 106 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 RNVU1-2-201ENST00000516326 135 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 AC093012.1-202ENST00000549403 582 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 AC004584.2-201ENST00000570407 410 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 MIR4324-201ENST00000584846 72 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 AL390208.1-201ENST00000605885 644 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 RNY4P7-201ENST00000364600 96 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 RNU6-10P-201ENST00000384036 107 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 RNU6-15P-201ENST00000384534 107 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 RN7SKP266-201ENST00000410232 287 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 RNU4-63P-201ENST00000411313 118 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 RPS15AP10-201ENST00000432472 382 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 MTND5P13-201ENST00000513046 1079 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 SNORA70.12-201ENST00000516084 153 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 AC008759.3-201ENST00000613300 508 ntBASIC-0.21□□□□□ -2.44
PRKDCP78527 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.22□□□□□ -2.44
PRKDCP78527 RNU6-815P-201ENST00000384080 113 ntBASIC-0.22□□□□□ -2.44
PRKDCP78527 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.22□□□□□ -2.44
PRKDCP78527 RNA5SP109-201ENST00000391010 116 ntBASIC-0.22□□□□□ -2.44
PRKDCP78527 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
PRKDCP78527 MIR1185-1-201ENST00000408598 86 ntBASIC-0.22□□□□□ -2.44
PRKDCP78527 MTND4P25-201ENST00000441039 533 ntBASIC-0.22□□□□□ -2.44
PRKDCP78527 AC010587.2-201ENST00000511727 448 ntBASIC-0.22□□□□□ -2.44
PRKDCP78527 SNORD60.2-201ENST00000516883 86 ntBASIC-0.22□□□□□ -2.44
PRKDCP78527 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.22□□□□□ -2.44
PRKDCP78527 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.22□□□□□ -2.44
PRKDCP78527 NAMPTP3-201ENST00000569273 224 ntBASIC-0.22□□□□□ -2.44
PRKDCP78527 AL020997.3-201ENST00000602843 359 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms