Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.7□□□□□ -1.98
RAE1P78406 MTND3P2-201ENST00000438452 342 ntBASIC2.7□□□□□ -1.98
RAE1P78406 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.7□□□□□ -1.98
RAE1P78406 RPL23AP58-201ENST00000440453 469 ntBASIC2.7□□□□□ -1.98
RAE1P78406 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.7□□□□□ -1.98
RAE1P78406 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.7□□□□□ -1.98
RAE1P78406 RPS3P1-201ENST00000456781 192 ntBASIC2.7□□□□□ -1.98
RAE1P78406 U8.22-201ENST00000459141 133 ntBASIC2.7□□□□□ -1.98
RAE1P78406 SCGB1D5P-201ENST00000515134 247 ntBASIC2.7□□□□□ -1.98
RAE1P78406 SNORA25.11-201ENST00000515935 105 ntBASIC2.7□□□□□ -1.98
RAE1P78406 RNA5SP341-201ENST00000516261 117 ntBASIC2.7□□□□□ -1.98
RAE1P78406 RNU6-1198P-201ENST00000516904 67 ntBASIC2.7□□□□□ -1.98
RAE1P78406 Y_RNA.715-201ENST00000517082 110 ntBASIC2.7□□□□□ -1.98
RAE1P78406 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.7□□□□□ -1.98
RAE1P78406 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.7□□□□□ -1.98
RAE1P78406 AC027176.1-201ENST00000560204 514 ntBASIC2.7□□□□□ -1.98
RAE1P78406 AL355297.3-201ENST00000604082 446 ntBASIC2.7□□□□□ -1.98
RAE1P78406 AC004832.5-201ENST00000608677 401 ntBASIC2.7□□□□□ -1.98
RAE1P78406 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.7□□□□□ -1.98
RAE1P78406 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.7□□□□□ -1.98
RAE1P78406 AC026241.1-201ENST00000517873 2142 ntBASIC2.69□□□□□ -1.98
RAE1P78406 MIR208A-201ENST00000362287 71 ntBASIC2.69□□□□□ -1.98
RAE1P78406 Y_RNA.27-201ENST00000362540 103 ntBASIC2.69□□□□□ -1.98
RAE1P78406 RNU4-50P-201ENST00000364361 141 ntBASIC2.69□□□□□ -1.98
RAE1P78406 SNORA68.1-201ENST00000364537 132 ntBASIC2.69□□□□□ -1.98
RAE1P78406 SNORA63.7-201ENST00000365579 123 ntBASIC2.69□□□□□ -1.98
RAE1P78406 RNY3P4-201ENST00000384428 101 ntBASIC2.69□□□□□ -1.98
RAE1P78406 RNU6-1105P-201ENST00000384774 107 ntBASIC2.69□□□□□ -1.98
RAE1P78406 MIR487A-201ENST00000385009 80 ntBASIC2.69□□□□□ -1.98
RAE1P78406 RNA5SP213-201ENST00000391031 106 ntBASIC2.69□□□□□ -1.98
RAE1P78406 MIR1252-201ENST00000408861 65 ntBASIC2.69□□□□□ -1.98
RAE1P78406 AL139132.1-201ENST00000431587 344 ntBASIC2.69□□□□□ -1.98
RAE1P78406 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.69□□□□□ -1.98
RAE1P78406 RPS15AP7-201ENST00000439294 405 ntBASIC2.69□□□□□ -1.98
RAE1P78406 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.69□□□□□ -1.98
RAE1P78406 MTCO3P8-201ENST00000453691 755 ntBASIC2.69□□□□□ -1.98
RAE1P78406 RNA5SP54-201ENST00000516951 92 ntBASIC2.69□□□□□ -1.98
RAE1P78406 RNU6-58P-201ENST00000517143 103 ntBASIC2.69□□□□□ -1.98
RAE1P78406 RN7SKP57-201ENST00000517248 293 ntBASIC2.69□□□□□ -1.98
RAE1P78406 AP002770.2-201ENST00000543613 532 ntBASIC2.69□□□□□ -1.98
RAE1P78406 AC107016.2-201ENST00000547968 190 ntBASIC2.69□□□□□ -1.98
RAE1P78406 MIR3944-201ENST00000581277 108 ntBASIC2.69□□□□□ -1.98
RAE1P78406 AL390123.1-201ENST00000603216 237 ntBASIC2.69□□□□□ -1.98
RAE1P78406 AC107871.2-201ENST00000612894 502 ntBASIC2.69□□□□□ -1.98
RAE1P78406 MIR7157-201ENST00000635801 60 ntBASIC2.69□□□□□ -1.98
RAE1P78406 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RAE1P78406 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RAE1P78406 MAPK10-266ENST00000641066 6555 ntBASIC2.68□□□□□ -1.98
RAE1P78406 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
RAE1P78406 RNU4-15P-201ENST00000362613 141 ntBASIC2.68□□□□□ -1.98
RAE1P78406 SNORA51.11-201ENST00000384442 131 ntBASIC2.68□□□□□ -1.98
RAE1P78406 RNU6-851P-201ENST00000384565 107 ntBASIC2.68□□□□□ -1.98
RAE1P78406 RNU6-541P-201ENST00000384709 110 ntBASIC2.68□□□□□ -1.98
RAE1P78406 MIR10B-201ENST00000385011 110 ntBASIC2.68□□□□□ -1.98
RAE1P78406 RNU6-159P-201ENST00000391080 106 ntBASIC2.68□□□□□ -1.98
RAE1P78406 MIR208B-201ENST00000401172 77 ntBASIC2.68□□□□□ -1.98
RAE1P78406 RNU6-1328P-201ENST00000410938 106 ntBASIC2.68□□□□□ -1.98
RAE1P78406 HMGB3P2-201ENST00000411913 584 ntBASIC2.68□□□□□ -1.98
RAE1P78406 EIF1P2-201ENST00000428233 350 ntBASIC2.68□□□□□ -1.98
RAE1P78406 RPS3AP12-201ENST00000443616 753 ntBASIC2.68□□□□□ -1.98
RAE1P78406 AC096638.1-201ENST00000444678 216 ntBASIC2.68□□□□□ -1.98
RAE1P78406 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.68□□□□□ -1.98
RAE1P78406 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.68□□□□□ -1.98
RAE1P78406 U8.20-201ENST00000459445 131 ntBASIC2.68□□□□□ -1.98
RAE1P78406 AC007215.1-201ENST00000464893 276 ntBASIC2.68□□□□□ -1.98
RAE1P78406 AC083906.5-201ENST00000503722 328 ntBASIC2.68□□□□□ -1.98
RAE1P78406 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
RAE1P78406 AC091826.1-201ENST00000514065 313 ntBASIC2.68□□□□□ -1.98
RAE1P78406 RNA5SP76-201ENST00000516277 87 ntBASIC2.68□□□□□ -1.98
RAE1P78406 SCARNA13-201ENST00000516672 275 ntBASIC2.68□□□□□ -1.98
RAE1P78406 RN7SKP282-201ENST00000516824 299 ntBASIC2.68□□□□□ -1.98
RAE1P78406 AC034114.1-201ENST00000520293 285 ntBASIC2.68□□□□□ -1.98
RAE1P78406 AC074050.1-201ENST00000563247 211 ntBASIC2.68□□□□□ -1.98
RAE1P78406 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.68□□□□□ -1.98
RAE1P78406 AC010620.2-201ENST00000600135 313 ntBASIC2.68□□□□□ -1.98
RAE1P78406 AL356575.1-201ENST00000603008 283 ntBASIC2.68□□□□□ -1.98
RAE1P78406 AL021879.1-201ENST00000611756 288 ntBASIC2.68□□□□□ -1.98
RAE1P78406 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.68□□□□□ -1.98
RAE1P78406 MIR7515-201ENST00000637837 67 ntBASIC2.68□□□□□ -1.98
RAE1P78406 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RAE1P78406 RNU1-76P-201ENST00000362903 159 ntBASIC2.67□□□□□ -1.98
RAE1P78406 RNU6-1309P-201ENST00000363305 108 ntBASIC2.67□□□□□ -1.98
RAE1P78406 Y_RNA.133-201ENST00000363428 110 ntBASIC2.67□□□□□ -1.98
RAE1P78406 SNORD46.1-201ENST00000364139 104 ntBASIC2.67□□□□□ -1.98
RAE1P78406 AC022018.1-201ENST00000430685 241 ntBASIC2.67□□□□□ -1.98
RAE1P78406 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.67□□□□□ -1.98
RAE1P78406 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.67□□□□□ -1.98
RAE1P78406 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.67□□□□□ -1.98
RAE1P78406 AC103975.1-201ENST00000482506 483 ntBASIC2.67□□□□□ -1.98
RAE1P78406 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.67□□□□□ -1.98
RAE1P78406 AC022868.1-201ENST00000517767 391 ntBASIC2.67□□□□□ -1.98
RAE1P78406 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.67□□□□□ -1.98
RAE1P78406 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.67□□□□□ -1.98
RAE1P78406 MIR5195-201ENST00000583555 115 ntBASIC2.67□□□□□ -1.98
RAE1P78406 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.67□□□□□ -1.98
RAE1P78406 RPL30P11-203ENST00000598995 310 ntBASIC2.67□□□□□ -1.98
RAE1P78406 RPS29P30-201ENST00000600975 111 ntBASIC2.67□□□□□ -1.98
RAE1P78406 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.67□□□□□ -1.98
RAE1P78406 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
RAE1P78406 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms