Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC116562.3-201ENST00000506136 177 ntBASIC-1.48□□□□□ -2.65
RPL39P62891 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.48□□□□□ -2.65
RPL39P62891 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-1.48□□□□□ -2.65
RPL39P62891 MIR4300-201ENST00000581016 96 ntBASIC-1.48□□□□□ -2.65
RPL39P62891 AC098483.2-201ENST00000603158 454 ntBASIC-1.48□□□□□ -2.65
RPL39P62891 AC068792.1-201ENST00000621354 417 ntBASIC-1.48□□□□□ -2.65
RPL39P62891 RNU6-105P-201ENST00000363909 104 ntBASIC-1.49□□□□□ -2.65
RPL39P62891 SNORD114-15-201ENST00000364687 72 ntBASIC-1.49□□□□□ -2.65
RPL39P62891 MIR653-201ENST00000385279 96 ntBASIC-1.49□□□□□ -2.65
RPL39P62891 AC097499.1-201ENST00000444277 208 ntBASIC-1.49□□□□□ -2.65
RPL39P62891 LINC01399-202ENST00000458450 244 ntBASIC-1.49□□□□□ -2.65
RPL39P62891 RNU2-53P-201ENST00000516257 147 ntBASIC-1.49□□□□□ -2.65
RPL39P62891 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-1.49□□□□□ -2.65
RPL39P62891 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-1.49□□□□□ -2.65
RPL39P62891 NAMPTP3-201ENST00000569273 224 ntBASIC-1.49□□□□□ -2.65
RPL39P62891 MIR1-1-201ENST00000362147 71 ntBASIC-1.5□□□□□ -2.65
RPL39P62891 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.5□□□□□ -2.65
RPL39P62891 RNU6-652P-201ENST00000365488 107 ntBASIC-1.5□□□□□ -2.65
RPL39P62891 MTCO2P31-201ENST00000402702 684 ntBASIC-1.5□□□□□ -2.65
RPL39P62891 BEND7P1-201ENST00000422058 457 ntBASIC-1.5□□□□□ -2.65
RPL39P62891 MRPS10P2-201ENST00000431226 381 ntBASIC-1.5□□□□□ -2.65
RPL39P62891 MTND1P30-201ENST00000441241 901 ntBASIC-1.5□□□□□ -2.65
RPL39P62891 AC083799.1-201ENST00000366451 910 ntBASIC-1.51□□□□□ -2.65
RPL39P62891 SNORD111-201ENST00000408139 94 ntBASIC-1.51□□□□□ -2.65
RPL39P62891 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-1.51□□□□□ -2.65
RPL39P62891 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC-1.51□□□□□ -2.65
RPL39P62891 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-1.51□□□□□ -2.65
RPL39P62891 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC-1.51□□□□□ -2.65
RPL39P62891 AC008628.1-201ENST00000508663 265 ntBASIC-1.51□□□□□ -2.65
RPL39P62891 RNU1-86P-201ENST00000516108 154 ntBASIC-1.51□□□□□ -2.65
RPL39P62891 RNU1-107P-201ENST00000516617 154 ntBASIC-1.51□□□□□ -2.65
RPL39P62891 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-1.51□□□□□ -2.65
RPL39P62891 AC137800.2-201ENST00000574375 120 ntBASIC-1.51□□□□□ -2.65
RPL39P62891 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-1.51□□□□□ -2.65
RPL39P62891 Y_RNA.332-201ENST00000365271 113 ntBASIC-1.52□□□□□ -2.65
RPL39P62891 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.52□□□□□ -2.65
RPL39P62891 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-1.52□□□□□ -2.65
RPL39P62891 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-1.52□□□□□ -2.65
RPL39P62891 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-1.52□□□□□ -2.65
RPL39P62891 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-1.52□□□□□ -2.65
RPL39P62891 RNU6-319P-201ENST00000516025 108 ntBASIC-1.52□□□□□ -2.65
RPL39P62891 RNU2-60P-201ENST00000517290 128 ntBASIC-1.52□□□□□ -2.65
RPL39P62891 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC-1.52□□□□□ -2.65
RPL39P62891 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.52□□□□□ -2.65
RPL39P62891 AL391001.1-201ENST00000602747 715 ntBASIC-1.52□□□□□ -2.65
RPL39P62891 AL355073.2-201ENST00000612106 557 ntBASIC-1.52□□□□□ -2.65
RPL39P62891 PART1_2.1-201ENST00000612397 250 ntBASIC-1.52□□□□□ -2.65
RPL39P62891 AC093875.1-201ENST00000623688 504 ntBASIC-1.52□□□□□ -2.65
RPL39P62891 AC098679.4-201ENST00000624241 654 ntBASIC-1.52□□□□□ -2.65
RPL39P62891 AC079416.3-201ENST00000624479 549 ntBASIC-1.52□□□□□ -2.65
RPL39P62891 MIR499B-201ENST00000636498 73 ntBASIC-1.52□□□□□ -2.65
RPL39P62891 Y_RNA.423-201ENST00000384057 113 ntBASIC-1.53□□□□□ -2.65
RPL39P62891 AL049545.1-201ENST00000401856 572 ntBASIC-1.53□□□□□ -2.65
RPL39P62891 AL079342.2-201ENST00000403367 482 ntBASIC-1.53□□□□□ -2.65
RPL39P62891 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-1.53□□□□□ -2.65
RPL39P62891 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.53□□□□□ -2.65
RPL39P62891 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-1.53□□□□□ -2.65
RPL39P62891 SRRM1P2-201ENST00000464531 1192 ntBASIC-1.53□□□□□ -2.65
RPL39P62891 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-1.53□□□□□ -2.65
RPL39P62891 AC009268.2-201ENST00000621925 457 ntBASIC-1.53□□□□□ -2.65
RPL39P62891 RNU6-862P-201ENST00000362804 105 ntBASIC-1.54□□□□□ -2.66
RPL39P62891 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.54□□□□□ -2.66
RPL39P62891 RNU6-452P-201ENST00000384406 107 ntBASIC-1.54□□□□□ -2.66
RPL39P62891 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-1.54□□□□□ -2.66
RPL39P62891 RNU6-57P-201ENST00000411348 103 ntBASIC-1.54□□□□□ -2.66
RPL39P62891 MTCYBP38-201ENST00000417160 1123 ntBASIC-1.54□□□□□ -2.66
RPL39P62891 AL353997.1-201ENST00000432936 108 ntBASIC-1.54□□□□□ -2.66
RPL39P62891 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-1.54□□□□□ -2.66
RPL39P62891 AL160314.1-201ENST00000490836 438 ntBASIC-1.54□□□□□ -2.66
RPL39P62891 AC091885.1-201ENST00000506658 268 ntBASIC-1.54□□□□□ -2.66
RPL39P62891 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-1.54□□□□□ -2.66
RPL39P62891 RNU6-581P-201ENST00000516214 105 ntBASIC-1.54□□□□□ -2.66
RPL39P62891 ACA59.2-201ENST00000517061 156 ntBASIC-1.54□□□□□ -2.66
RPL39P62891 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC-1.54□□□□□ -2.66
RPL39P62891 AL157871.3-201ENST00000557231 293 ntBASIC-1.54□□□□□ -2.66
RPL39P62891 MIR3136-201ENST00000583498 78 ntBASIC-1.54□□□□□ -2.66
RPL39P62891 AC068790.2-201ENST00000602601 557 ntBASIC-1.54□□□□□ -2.66
RPL39P62891 BCRP9-201ENST00000605312 388 ntBASIC-1.54□□□□□ -2.66
RPL39P62891 AC239868.4-201ENST00000608318 671 ntBASIC-1.54□□□□□ -2.66
RPL39P62891 AC008759.3-201ENST00000613300 508 ntBASIC-1.54□□□□□ -2.66
RPL39P62891 SNORD114-19-201ENST00000363072 75 ntBASIC-1.55□□□□□ -2.66
RPL39P62891 RNU6-529P-201ENST00000363383 104 ntBASIC-1.55□□□□□ -2.66
RPL39P62891 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.55□□□□□ -2.66
RPL39P62891 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.55□□□□□ -2.66
RPL39P62891 MIR520G-201ENST00000385064 90 ntBASIC-1.55□□□□□ -2.66
RPL39P62891 MIR520H-201ENST00000385126 88 ntBASIC-1.55□□□□□ -2.66
RPL39P62891 AL121978.1-201ENST00000402778 359 ntBASIC-1.55□□□□□ -2.66
RPL39P62891 ARL5AP1-201ENST00000418991 388 ntBASIC-1.55□□□□□ -2.66
RPL39P62891 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-1.55□□□□□ -2.66
RPL39P62891 AP003716.2-201ENST00000528260 108 ntBASIC-1.55□□□□□ -2.66
RPL39P62891 AC013828.2-201ENST00000532487 235 ntBASIC-1.55□□□□□ -2.66
RPL39P62891 AC090049.2-201ENST00000550377 109 ntBASIC-1.55□□□□□ -2.66
RPL39P62891 MIR4742-201ENST00000581069 85 ntBASIC-1.55□□□□□ -2.66
RPL39P62891 MTND3P19-201ENST00000603825 345 ntBASIC-1.55□□□□□ -2.66
RPL39P62891 AL590491.3-201ENST00000610731 82 ntBASIC-1.55□□□□□ -2.66
RPL39P62891 AC106754.2-201ENST00000623006 233 ntBASIC-1.55□□□□□ -2.66
RPL39P62891 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-1.55□□□□□ -2.66
RPL39P62891 RNU6-534P-201ENST00000364877 106 ntBASIC-1.56□□□□□ -2.66
RPL39P62891 RNU6-1280P-201ENST00000365211 107 ntBASIC-1.56□□□□□ -2.66
RPL39P62891 SNORD82-201ENST00000365530 70 ntBASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms