Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 RNA5SP450-201ENST00000411206 102 ntBASIC1.83□□□□□ -2.12
RPS4XP62701 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.83□□□□□ -2.12
RPS4XP62701 AC012306.1-201ENST00000423267 114 ntBASIC1.83□□□□□ -2.12
RPS4XP62701 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.83□□□□□ -2.12
RPS4XP62701 MTND3P9-201ENST00000429526 346 ntBASIC1.83□□□□□ -2.12
RPS4XP62701 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.83□□□□□ -2.12
RPS4XP62701 AL645568.3-201ENST00000433683 316 ntBASIC1.83□□□□□ -2.12
RPS4XP62701 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.83□□□□□ -2.12
RPS4XP62701 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.83□□□□□ -2.12
RPS4XP62701 RNU7-66P-201ENST00000459469 62 ntBASIC1.83□□□□□ -2.12
RPS4XP62701 AC007547.1-201ENST00000462177 490 ntBASIC1.83□□□□□ -2.12
RPS4XP62701 MTCO1P29-201ENST00000496868 288 ntBASIC1.83□□□□□ -2.12
RPS4XP62701 AC116337.1-201ENST00000509680 687 ntBASIC1.83□□□□□ -2.12
RPS4XP62701 AC093259.1-201ENST00000509755 300 ntBASIC1.83□□□□□ -2.12
RPS4XP62701 FAM206BP-201ENST00000510179 541 ntBASIC1.83□□□□□ -2.12
RPS4XP62701 EIF4A1P12-201ENST00000551910 141 ntBASIC1.83□□□□□ -2.12
RPS4XP62701 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.83□□□□□ -2.12
RPS4XP62701 CTHRC1P1-201ENST00000605383 469 ntBASIC1.83□□□□□ -2.12
RPS4XP62701 MIR6840-201ENST00000611937 71 ntBASIC1.83□□□□□ -2.12
RPS4XP62701 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
RPS4XP62701 AC139792.2-201ENST00000624218 587 ntBASIC1.83□□□□□ -2.12
RPS4XP62701 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RPS4XP62701 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.83□□□□□ -2.12
RPS4XP62701 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.83□□□□□ -2.12
RPS4XP62701 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
RPS4XP62701 Y_RNA.99-201ENST00000363138 105 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 RNU6-743P-201ENST00000364151 106 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 RNU6-234P-201ENST00000365229 104 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 RNU4-12P-201ENST00000365233 139 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 SNORA36A-201ENST00000384221 132 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 RNU6-378P-201ENST00000384324 107 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 SNORA51.11-201ENST00000384442 131 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 Y_RNA.573-201ENST00000384763 105 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 AL357139.1-201ENST00000407792 426 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 RNU6-325P-201ENST00000411132 105 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 VN1R36P-201ENST00000414936 291 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 ZNF885P-201ENST00000420174 1098 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 C8orf59P1-201ENST00000429930 303 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.82□□□□□ -2.12
RPS4XP62701 AC021146.2-201ENST00000504736 556 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.82□□□□□ -2.12
RPS4XP62701 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.82□□□□□ -2.12
RPS4XP62701 AC109446.1-201ENST00000566172 220 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 AC009994.1-201ENST00000606889 253 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 AL353997.5-201ENST00000618886 171 ntBASIC1.82□□□□□ -2.12
RPS4XP62701 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RPS4XP62701 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RPS4XP62701 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RPS4XP62701 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RPS4XP62701 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.81□□□□□ -2.12
RPS4XP62701 AL356292.1-201ENST00000283110 373 ntBASIC1.81□□□□□ -2.12
RPS4XP62701 Y_RNA.6-201ENST00000362350 114 ntBASIC1.81□□□□□ -2.12
RPS4XP62701 RNU6-534P-201ENST00000364877 106 ntBASIC1.81□□□□□ -2.12
RPS4XP62701 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RPS4XP62701 AL023284.1-201ENST00000403956 276 ntBASIC1.81□□□□□ -2.12
RPS4XP62701 MIR1283-2-201ENST00000408621 87 ntBASIC1.81□□□□□ -2.12
RPS4XP62701 RNA5SP118-201ENST00000410385 109 ntBASIC1.81□□□□□ -2.12
RPS4XP62701 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.81□□□□□ -2.12
RPS4XP62701 USP9YP28-201ENST00000435142 589 ntBASIC1.81□□□□□ -2.12
RPS4XP62701 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.81□□□□□ -2.12
RPS4XP62701 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RPS4XP62701 AC079804.2-201ENST00000490376 200 ntBASIC1.81□□□□□ -2.12
RPS4XP62701 MIR449C-201ENST00000516047 92 ntBASIC1.81□□□□□ -2.12
RPS4XP62701 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.81□□□□□ -2.12
RPS4XP62701 AL133215.3-201ENST00000609801 448 ntBASIC1.81□□□□□ -2.12
RPS4XP62701 MIR8076-201ENST00000611401 83 ntBASIC1.81□□□□□ -2.12
RPS4XP62701 AC090517.2-201ENST00000614966 680 ntBASIC1.81□□□□□ -2.12
RPS4XP62701 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.81□□□□□ -2.12
RPS4XP62701 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RPS4XP62701 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.81□□□□□ -2.12
RPS4XP62701 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
RPS4XP62701 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
RPS4XP62701 RNA5SP99-201ENST00000364020 114 ntBASIC1.8□□□□□ -2.12
RPS4XP62701 RNU6-1164P-201ENST00000364428 107 ntBASIC1.8□□□□□ -2.12
RPS4XP62701 RNU6-877P-201ENST00000383868 107 ntBASIC1.8□□□□□ -2.12
RPS4XP62701 MIR17-201ENST00000385012 84 ntBASIC1.8□□□□□ -2.12
RPS4XP62701 AC019129.1-201ENST00000403786 261 ntBASIC1.8□□□□□ -2.12
RPS4XP62701 MTCO3P18-201ENST00000440206 761 ntBASIC1.8□□□□□ -2.12
RPS4XP62701 RPS29P25-201ENST00000481709 171 ntBASIC1.8□□□□□ -2.12
RPS4XP62701 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.8□□□□□ -2.12
RPS4XP62701 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.8□□□□□ -2.12
RPS4XP62701 AC096745.1-201ENST00000509945 370 ntBASIC1.8□□□□□ -2.12
RPS4XP62701 RNU6-991P-201ENST00000516168 107 ntBASIC1.8□□□□□ -2.12
RPS4XP62701 RNU6-295P-201ENST00000516901 104 ntBASIC1.8□□□□□ -2.12
RPS4XP62701 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.8□□□□□ -2.12
RPS4XP62701 MIR5089-201ENST00000580047 84 ntBASIC1.8□□□□□ -2.12
RPS4XP62701 FGF7P1-201ENST00000582820 288 ntBASIC1.8□□□□□ -2.12
RPS4XP62701 RPL17P51-201ENST00000605218 238 ntBASIC1.8□□□□□ -2.12
RPS4XP62701 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.8□□□□□ -2.12
RPS4XP62701 AL138726.1-201ENST00000614873 333 ntBASIC1.8□□□□□ -2.12
RPS4XP62701 MIR3688-2-201ENST00000636963 87 ntBASIC1.8□□□□□ -2.12
RPS4XP62701 AC008555.8-201ENST00000623602 2168 ntBASIC1.8□□□□□ -2.12
RPS4XP62701 ZNF355P-201ENST00000427301 3216 ntBASIC1.79□□□□□ -2.12
RPS4XP62701 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RPS4XP62701 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
RPS4XP62701 RNU5B-2P-201ENST00000363036 113 ntBASIC1.79□□□□□ -2.12
RPS4XP62701 SNORD115-3-201ENST00000363100 82 ntBASIC1.79□□□□□ -2.12
RPS4XP62701 Y_RNA.332-201ENST00000365271 113 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms