Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC011155.2-201ENST00000623202 216 ntBASIC0.83□□□□□ -2.28
ACTBP60709 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.82□□□□□ -2.28
ACTBP60709 Y_RNA.191-201ENST00000363972 113 ntBASIC0.82□□□□□ -2.28
ACTBP60709 RNU1-96P-201ENST00000364163 162 ntBASIC0.82□□□□□ -2.28
ACTBP60709 RNU4-38P-201ENST00000364472 129 ntBASIC0.82□□□□□ -2.28
ACTBP60709 RNU6-1303P-201ENST00000364841 107 ntBASIC0.82□□□□□ -2.28
ACTBP60709 RNU1-36P-201ENST00000365130 165 ntBASIC0.82□□□□□ -2.28
ACTBP60709 RNU6-715P-201ENST00000365204 103 ntBASIC0.82□□□□□ -2.28
ACTBP60709 RNU5E-5P-201ENST00000365379 116 ntBASIC0.82□□□□□ -2.28
ACTBP60709 SNORA20.2-201ENST00000383922 131 ntBASIC0.82□□□□□ -2.28
ACTBP60709 RNU6-116P-201ENST00000384042 109 ntBASIC0.82□□□□□ -2.28
ACTBP60709 RNU2-8P-201ENST00000410727 190 ntBASIC0.82□□□□□ -2.28
ACTBP60709 MTCO3P29-201ENST00000432119 779 ntBASIC0.82□□□□□ -2.28
ACTBP60709 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.82□□□□□ -2.28
ACTBP60709 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.82□□□□□ -2.28
ACTBP60709 GAPDHP17-201ENST00000449858 1001 ntBASIC0.82□□□□□ -2.28
ACTBP60709 RNU7-14P-201ENST00000459331 62 ntBASIC0.82□□□□□ -2.28
ACTBP60709 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.82□□□□□ -2.28
ACTBP60709 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.82□□□□□ -2.28
ACTBP60709 RN7SKP88-201ENST00000516847 250 ntBASIC0.82□□□□□ -2.28
ACTBP60709 HSPE1P4-201ENST00000550617 308 ntBASIC0.82□□□□□ -2.28
ACTBP60709 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.82□□□□□ -2.28
ACTBP60709 AC005771.1-201ENST00000585581 349 ntBASIC0.82□□□□□ -2.28
ACTBP60709 MZT1P2-201ENST00000604387 248 ntBASIC0.82□□□□□ -2.28
ACTBP60709 AC064872.1-201ENST00000604823 1072 ntBASIC0.82□□□□□ -2.28
ACTBP60709 AC080078.3-201ENST00000605407 463 ntBASIC0.82□□□□□ -2.28
ACTBP60709 AC009994.1-201ENST00000606889 253 ntBASIC0.82□□□□□ -2.28
ACTBP60709 7SK.8-201ENST00000612110 250 ntBASIC0.82□□□□□ -2.28
ACTBP60709 7SK.11-201ENST00000615477 250 ntBASIC0.82□□□□□ -2.28
ACTBP60709 7SK.13-201ENST00000622040 250 ntBASIC0.82□□□□□ -2.28
ACTBP60709 Y_RNA.367-201ENST00000365544 101 ntBASIC0.81□□□□□ -2.28
ACTBP60709 RNU6-378P-201ENST00000384324 107 ntBASIC0.81□□□□□ -2.28
ACTBP60709 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.81□□□□□ -2.28
ACTBP60709 SSR1P2-201ENST00000415208 787 ntBASIC0.81□□□□□ -2.28
ACTBP60709 AL356583.2-201ENST00000426536 280 ntBASIC0.81□□□□□ -2.28
ACTBP60709 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.81□□□□□ -2.28
ACTBP60709 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.81□□□□□ -2.28
ACTBP60709 USP9YP12-201ENST00000450481 570 ntBASIC0.81□□□□□ -2.28
ACTBP60709 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.81□□□□□ -2.28
ACTBP60709 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.81□□□□□ -2.28
ACTBP60709 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.81□□□□□ -2.28
ACTBP60709 RNU5F-4P-201ENST00000516581 114 ntBASIC0.81□□□□□ -2.28
ACTBP60709 CYCSP23-201ENST00000519781 313 ntBASIC0.81□□□□□ -2.28
ACTBP60709 CYP4A27P-201ENST00000567218 190 ntBASIC0.81□□□□□ -2.28
ACTBP60709 Z98751.3-201ENST00000604447 521 ntBASIC0.81□□□□□ -2.28
ACTBP60709 AL365434.2-201ENST00000607979 234 ntBASIC0.81□□□□□ -2.28
ACTBP60709 MIR6504-201ENST00000613520 61 ntBASIC0.81□□□□□ -2.28
ACTBP60709 AC027807.2-201ENST00000616099 408 ntBASIC0.81□□□□□ -2.28
ACTBP60709 AL133216.2-202ENST00000634512 349 ntBASIC0.81□□□□□ -2.28
ACTBP60709 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.81□□□□□ -2.28
ACTBP60709 AC007671.2-201ENST00000637344 619 ntBASIC0.81□□□□□ -2.28
ACTBP60709 RNY1P12-201ENST00000364251 105 ntBASIC0.8□□□□□ -2.28
ACTBP60709 MIR1276-201ENST00000408707 83 ntBASIC0.8□□□□□ -2.28
ACTBP60709 RNU2-64P-201ENST00000411315 191 ntBASIC0.8□□□□□ -2.28
ACTBP60709 AC104850.1-201ENST00000435940 476 ntBASIC0.8□□□□□ -2.28
ACTBP60709 Z73417.1-201ENST00000447373 778 ntBASIC0.8□□□□□ -2.28
ACTBP60709 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.8□□□□□ -2.28
ACTBP60709 MTCYBP1-201ENST00000454315 1119 ntBASIC0.8□□□□□ -2.28
ACTBP60709 SNRPGP7-201ENST00000469016 106 ntBASIC0.8□□□□□ -2.28
ACTBP60709 AC016632.1-201ENST00000503994 196 ntBASIC0.8□□□□□ -2.28
ACTBP60709 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.8□□□□□ -2.28
ACTBP60709 AC067942.3-201ENST00000512025 362 ntBASIC0.8□□□□□ -2.28
ACTBP60709 SNORD27.1-201ENST00000516319 72 ntBASIC0.8□□□□□ -2.28
ACTBP60709 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.8□□□□□ -2.28
ACTBP60709 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.8□□□□□ -2.28
ACTBP60709 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.8□□□□□ -2.28
ACTBP60709 AC021231.3-201ENST00000558497 370 ntBASIC0.8□□□□□ -2.28
ACTBP60709 SNORA59B-202ENST00000578183 701 ntBASIC0.8□□□□□ -2.28
ACTBP60709 MIR3664-201ENST00000579074 99 ntBASIC0.8□□□□□ -2.28
ACTBP60709 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
ACTBP60709 MTCO2P2-201ENST00000591258 225 ntBASIC0.8□□□□□ -2.28
ACTBP60709 AC211469.2-201ENST00000605461 205 ntBASIC0.8□□□□□ -2.28
ACTBP60709 AC008147.4-201ENST00000617570 1204 ntBASIC0.8□□□□□ -2.28
ACTBP60709 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
ACTBP60709 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.8□□□□□ -2.28
ACTBP60709 OR4G1P-203ENST00000641984 1631 ntBASIC0.79□□□□□ -2.28
ACTBP60709 RNU6-552P-201ENST00000362869 119 ntBASIC0.79□□□□□ -2.28
ACTBP60709 SNORD114-27-201ENST00000363766 70 ntBASIC0.79□□□□□ -2.28
ACTBP60709 RNU6-534P-201ENST00000364877 106 ntBASIC0.79□□□□□ -2.28
ACTBP60709 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
ACTBP60709 AC060773.1-201ENST00000421698 310 ntBASIC0.79□□□□□ -2.28
ACTBP60709 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.79□□□□□ -2.28
ACTBP60709 USP9YP14-201ENST00000430663 563 ntBASIC0.79□□□□□ -2.28
ACTBP60709 AC002486.1-201ENST00000435098 391 ntBASIC0.79□□□□□ -2.28
ACTBP60709 NDUFA5P4-201ENST00000436704 385 ntBASIC0.79□□□□□ -2.28
ACTBP60709 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.79□□□□□ -2.28
ACTBP60709 EPS15P1-201ENST00000448836 336 ntBASIC0.79□□□□□ -2.28
ACTBP60709 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.79□□□□□ -2.28
ACTBP60709 LRRC34P2-201ENST00000514850 553 ntBASIC0.79□□□□□ -2.28
ACTBP60709 SCARNA16.2-201ENST00000516520 172 ntBASIC0.79□□□□□ -2.28
ACTBP60709 RNU2-46P-201ENST00000517038 113 ntBASIC0.79□□□□□ -2.28
ACTBP60709 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.79□□□□□ -2.28
ACTBP60709 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.79□□□□□ -2.28
ACTBP60709 AL442163.3-201ENST00000554110 156 ntBASIC0.79□□□□□ -2.28
ACTBP60709 AC008015.1-201ENST00000555505 465 ntBASIC0.79□□□□□ -2.28
ACTBP60709 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.79□□□□□ -2.28
ACTBP60709 MIR4742-201ENST00000581069 85 ntBASIC0.79□□□□□ -2.28
ACTBP60709 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.79□□□□□ -2.28
ACTBP60709 AC013244.2-201ENST00000603396 103 ntBASIC0.79□□□□□ -2.28
ACTBP60709 AC107304.1-201ENST00000604229 296 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms