Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 RNA5SP171-201ENST00000391071 115 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 SNORA17.3-201ENST00000391159 129 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 MIR942-201ENST00000401111 86 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 AC012306.1-201ENST00000423267 114 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.44□□□□□ -2.34
HIST1H2BDP58876 MTCO3P18-201ENST00000440206 761 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 RN7SKP210-201ENST00000459176 261 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 RPS27P22-201ENST00000478056 241 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 COX6CP6-201ENST00000490840 228 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 RPS26P48-201ENST00000491713 339 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.44□□□□□ -2.34
HIST1H2BDP58876 MTCO3P7-201ENST00000510008 774 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 RNA5SP255-201ENST00000516370 107 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 RNU6-948P-201ENST00000516374 107 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 AC024995.1-201ENST00000523014 93 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 AL390123.1-201ENST00000603216 237 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 AL031281.1-201ENST00000604049 488 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 AC104458.1-201ENST00000608243 463 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 GHRLOS.1-201ENST00000610995 70 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 AC104465.1-201ENST00000611365 139 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 AC107308.1-201ENST00000615897 301 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 AC023934.1-201ENST00000574529 2389 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.43□□□□□ -2.34
HIST1H2BDP58876 SNORA80D-201ENST00000384488 135 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 RNU6-1235P-201ENST00000384559 107 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 RNU6-550P-201ENST00000391057 101 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 RNA5SP467-201ENST00000391274 118 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 RNU2-8P-201ENST00000410727 190 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.43□□□□□ -2.34
HIST1H2BDP58876 TIMM9P3-201ENST00000428659 274 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 CETN4P-201ENST00000432407 469 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 MTCYBP1-201ENST00000454315 1119 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 RNU6-498P-201ENST00000459468 107 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.43□□□□□ -2.34
HIST1H2BDP58876 RPS29P21-201ENST00000496272 170 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.43□□□□□ -2.34
HIST1H2BDP58876 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.43□□□□□ -2.34
HIST1H2BDP58876 SCARNA24.1-201ENST00000516465 137 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 RNU6-1178P-201ENST00000516674 107 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
HIST1H2BDP58876 MIR4513-201ENST00000581077 86 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 BNIP3P10-201ENST00000605360 577 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 AL136221.1-201ENST00000621449 509 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 AC106754.2-201ENST00000623006 233 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 SNORD3E-202ENST00000627253 216 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 AC068700.1-201ENST00000565862 3754 ntBASIC0.43□□□□□ -2.34
HIST1H2BDP58876 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
HIST1H2BDP58876 RNU4-12P-201ENST00000365233 139 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 RNU6-975P-201ENST00000384296 105 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 SNORA40.4-201ENST00000390971 128 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 RNU6-1093P-201ENST00000391194 107 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 RNU11-5P-201ENST00000391216 129 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 RNU6ATAC34P-201ENST00000408879 121 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 AC090960.1-201ENST00000421072 306 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.42□□□□□ -2.34
HIST1H2BDP58876 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.42□□□□□ -2.34
HIST1H2BDP58876 BET1P1-201ENST00000482276 359 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 AC005840.1-201ENST00000498412 377 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 AC010486.2-201ENST00000505572 483 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.42□□□□□ -2.34
HIST1H2BDP58876 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.42□□□□□ -2.34
HIST1H2BDP58876 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.42□□□□□ -2.34
HIST1H2BDP58876 RNU6-1146P-201ENST00000516282 102 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 RNU6-1069P-201ENST00000516612 133 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.42□□□□□ -2.34
HIST1H2BDP58876 AC103996.1-201ENST00000555468 102 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 AC091805.2-201ENST00000603848 235 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 AP001836.1-201ENST00000604675 523 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 AL353765.1-201ENST00000605514 183 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 RNU4-5P-201ENST00000607255 135 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 AL157392.4-201ENST00000609756 345 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.42□□□□□ -2.34
HIST1H2BDP58876 MIR6857-201ENST00000613267 93 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 AC138649.3-201ENST00000622154 254 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 AC005858.4-201ENST00000623191 700 ntBASIC0.42□□□□□ -2.34
HIST1H2BDP58876 RNU6-827P-201ENST00000365553 106 ntBASIC0.41□□□□□ -2.34
HIST1H2BDP58876 RNU6-1200P-201ENST00000384162 107 ntBASIC0.41□□□□□ -2.34
HIST1H2BDP58876 RNU6-110P-201ENST00000384508 104 ntBASIC0.41□□□□□ -2.34
HIST1H2BDP58876 RNA5SP323-201ENST00000391094 133 ntBASIC0.41□□□□□ -2.34
HIST1H2BDP58876 RN7SKP200-201ENST00000410564 320 ntBASIC0.41□□□□□ -2.34
HIST1H2BDP58876 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.41□□□□□ -2.34
HIST1H2BDP58876 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC0.41□□□□□ -2.34
HIST1H2BDP58876 NDUFAF4P3-201ENST00000456468 525 ntBASIC0.41□□□□□ -2.34
HIST1H2BDP58876 SRRM1P2-201ENST00000464531 1192 ntBASIC0.41□□□□□ -2.34
HIST1H2BDP58876 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.41□□□□□ -2.34
HIST1H2BDP58876 AK3P2-201ENST00000507976 429 ntBASIC0.41□□□□□ -2.34
HIST1H2BDP58876 RNU4-54P-201ENST00000516428 129 ntBASIC0.41□□□□□ -2.34
HIST1H2BDP58876 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
HIST1H2BDP58876 APOOP3-201ENST00000536787 586 ntBASIC0.41□□□□□ -2.34
HIST1H2BDP58876 AC080078.2-201ENST00000603766 501 ntBASIC0.41□□□□□ -2.34
HIST1H2BDP58876 AC022217.4-201ENST00000604389 163 ntBASIC0.41□□□□□ -2.34
HIST1H2BDP58876 AC138749.5-201ENST00000611461 208 ntBASIC0.41□□□□□ -2.34
HIST1H2BDP58876 AC116165.2-201ENST00000616705 206 ntBASIC0.41□□□□□ -2.34
HIST1H2BDP58876 AC009159.2-201ENST00000617603 606 ntBASIC0.41□□□□□ -2.34
HIST1H2BDP58876 AC011155.2-201ENST00000623202 216 ntBASIC0.41□□□□□ -2.34
HIST1H2BDP58876 AL603839.4-201ENST00000624658 1005 ntBASIC0.41□□□□□ -2.34
HIST1H2BDP58876 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.41□□□□□ -2.34
HIST1H2BDP58876 AC018630.2-201ENST00000534866 2403 ntBASIC0.4□□□□□ -2.34
HIST1H2BDP58876 RNU5F-6P-201ENST00000362979 116 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms