Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RNU6-1026P-201ENST00000384465 108 ntBASIC0.12□□□□□ -2.39
GTF2A1P52655 RNU2-62P-201ENST00000410868 191 ntBASIC0.12□□□□□ -2.39
GTF2A1P52655 RNA5SP247-201ENST00000411181 105 ntBASIC0.12□□□□□ -2.39
GTF2A1P52655 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.12□□□□□ -2.39
GTF2A1P52655 RPL17P35-201ENST00000432217 549 ntBASIC0.12□□□□□ -2.39
GTF2A1P52655 AC243964.1-201ENST00000441814 261 ntBASIC0.12□□□□□ -2.39
GTF2A1P52655 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.12□□□□□ -2.39
GTF2A1P52655 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
GTF2A1P52655 AL137100.2-201ENST00000555786 315 ntBASIC0.12□□□□□ -2.39
GTF2A1P52655 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.12□□□□□ -2.39
GTF2A1P52655 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.12□□□□□ -2.39
GTF2A1P52655 BNIP3P26-201ENST00000600827 554 ntBASIC0.12□□□□□ -2.39
GTF2A1P52655 Z98751.3-201ENST00000604447 521 ntBASIC0.12□□□□□ -2.39
GTF2A1P52655 AC108747.1-201ENST00000609508 535 ntBASIC0.12□□□□□ -2.39
GTF2A1P52655 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.12□□□□□ -2.39
GTF2A1P52655 AL603839.4-201ENST00000624658 1005 ntBASIC0.12□□□□□ -2.39
GTF2A1P52655 U4.7-201ENST00000638126 106 ntBASIC0.12□□□□□ -2.39
GTF2A1P52655 MTND5P16-201ENST00000460269 1703 ntBASIC0.11□□□□□ -2.39
GTF2A1P52655 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
GTF2A1P52655 Y_RNA.132-201ENST00000363421 102 ntBASIC0.11□□□□□ -2.39
GTF2A1P52655 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.11□□□□□ -2.39
GTF2A1P52655 RNU6-418P-201ENST00000384035 107 ntBASIC0.11□□□□□ -2.39
GTF2A1P52655 RNU6-43P-201ENST00000384302 107 ntBASIC0.11□□□□□ -2.39
GTF2A1P52655 MIR653-201ENST00000385279 96 ntBASIC0.11□□□□□ -2.39
GTF2A1P52655 SNORA12.1-201ENST00000390873 148 ntBASIC0.11□□□□□ -2.39
GTF2A1P52655 SNORA16.2-201ENST00000390991 127 ntBASIC0.11□□□□□ -2.39
GTF2A1P52655 MTND4P3-201ENST00000417829 541 ntBASIC0.11□□□□□ -2.39
GTF2A1P52655 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.11□□□□□ -2.39
GTF2A1P52655 HMGN2P34-201ENST00000437647 269 ntBASIC0.11□□□□□ -2.39
GTF2A1P52655 RNA5SP216-201ENST00000516111 123 ntBASIC0.11□□□□□ -2.39
GTF2A1P52655 RNU6-405P-201ENST00000516637 110 ntBASIC0.11□□□□□ -2.39
GTF2A1P52655 RNU6-467P-201ENST00000517027 110 ntBASIC0.11□□□□□ -2.39
GTF2A1P52655 AC007834.2-201ENST00000536310 343 ntBASIC0.11□□□□□ -2.39
GTF2A1P52655 PRELID3BP2-201ENST00000605362 201 ntBASIC0.11□□□□□ -2.39
GTF2A1P52655 AC092354.1-201ENST00000606057 376 ntBASIC0.11□□□□□ -2.39
GTF2A1P52655 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.11□□□□□ -2.39
GTF2A1P52655 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
GTF2A1P52655 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
GTF2A1P52655 AC092268.1-201ENST00000342691 405 ntBASIC0.1□□□□□ -2.39
GTF2A1P52655 snoU2-30.2-201ENST00000362805 70 ntBASIC0.1□□□□□ -2.39
GTF2A1P52655 RNU6-1141P-201ENST00000364520 107 ntBASIC0.1□□□□□ -2.39
GTF2A1P52655 RNU1-133P-201ENST00000364867 167 ntBASIC0.1□□□□□ -2.39
GTF2A1P52655 MIR936-201ENST00000401264 98 ntBASIC0.1□□□□□ -2.39
GTF2A1P52655 AC019070.1-201ENST00000415008 1024 ntBASIC0.1□□□□□ -2.39
GTF2A1P52655 RPL22P18-201ENST00000417197 377 ntBASIC0.1□□□□□ -2.39
GTF2A1P52655 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.1□□□□□ -2.39
GTF2A1P52655 AC002486.1-201ENST00000435098 391 ntBASIC0.1□□□□□ -2.39
GTF2A1P52655 RPS25P9-201ENST00000435591 252 ntBASIC0.1□□□□□ -2.39
GTF2A1P52655 AC244670.1-201ENST00000436879 112 ntBASIC0.1□□□□□ -2.39
GTF2A1P52655 NFU1P2-201ENST00000448700 469 ntBASIC0.1□□□□□ -2.39
GTF2A1P52655 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.1□□□□□ -2.39
GTF2A1P52655 HMGB1P29-201ENST00000505659 499 ntBASIC0.1□□□□□ -2.39
GTF2A1P52655 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.1□□□□□ -2.39
GTF2A1P52655 MIR3923-201ENST00000579521 83 ntBASIC0.1□□□□□ -2.39
GTF2A1P52655 AC144521.1-201ENST00000607148 956 ntBASIC0.1□□□□□ -2.39
GTF2A1P52655 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
GTF2A1P52655 RNU6-224P-201ENST00000384055 107 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 RPS20P2-201ENST00000402520 389 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 AC010975.2-201ENST00000427781 588 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 TIMM9P3-201ENST00000428659 274 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 MTND5P2-201ENST00000442927 1142 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 TAF9P1-201ENST00000445421 515 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 AL133217.1-201ENST00000450980 425 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 RPS20P10-201ENST00000451209 253 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 TAF9P2-201ENST00000454958 515 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 SNORA70.12-201ENST00000516084 153 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 RNU2-34P-201ENST00000516534 121 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 EIF4A1P12-201ENST00000551910 141 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 MTND3P13-201ENST00000574391 343 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 AC025627.3-201ENST00000582078 182 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 MIR544B-201ENST00000582372 78 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 AC005776.1-201ENST00000603164 290 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 RPL17P51-201ENST00000605218 238 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 AC091965.4-201ENST00000607691 587 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 AC131235.4-201ENST00000609288 620 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 AL138726.1-201ENST00000614873 333 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.09□□□□□ -2.4
GTF2A1P52655 AL513423.1-201ENST00000621695 132 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 AC068880.4-201ENST00000623082 495 ntBASIC0.09□□□□□ -2.4
GTF2A1P52655 RNU6-545P-201ENST00000362681 104 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 RNU6-560P-201ENST00000364007 108 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 Y_RNA.224-201ENST00000364308 111 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 RNU4-76P-201ENST00000364509 141 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 RNU4-56P-201ENST00000364700 142 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 RNY1P8-201ENST00000383970 114 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 RNU6-378P-201ENST00000384324 107 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 MIR216A-201ENST00000385063 110 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 SNORA26.3-201ENST00000391119 136 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 AL355796.1-201ENST00000406706 323 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 EEF1A1P40-201ENST00000412883 573 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 AC244098.3-201ENST00000424803 96 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 HSFY7P-201ENST00000432672 318 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 MTND1P32-201ENST00000433043 938 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 USP9YP28-201ENST00000435142 589 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 HSFY8P-201ENST00000437934 318 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.08□□□□□ -2.4
GTF2A1P52655 U7.7-201ENST00000459276 60 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms